Information for 15-TKCAGSCTGAACA (Motif 14)

A C G T A C G T A G T C C G T A A C T G A T G C A G T C A C G T A C T G G T C A C G T A A T G C C G T A
Reverse Opposite:
C G A T A T C G A C G T A C G T A G T C C G T A A C T G A T C G A G T C A C G T A C T G G T C A G T C A
p-value:1e-6
log p-value:-1.586e+01
Information Content per bp:1.901
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets28.8 +/- 5.2bp
Average Position of motif in Background54.2 +/- 15.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TKCAGSCTGAACA
-BCAGACWA----
 A C G T A C G T A G T C C G T A A C T G A T G C A G T C A C G T A C T G G T C A C G T A A T G C C G T A
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T

FOXF2/MA0030.1/Jaspar

Match Rank:2
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TKCAGSCTGAACA--
-CAAACGTAAACAAT
 A C G T A C G T A G T C C G T A A C T G A T G C A G T C A C G T A C T G G T C A C G T A A T G C C G T A A C G T A C G T
A C G T A G T C G T C A G C T A C G T A T A G C C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A C G A T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---TKCAGSCTGAACA
NAGGTCACNNTGACC-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A T G C A G T C A C G T A C T G G T C A C G T A A T G C C G T A
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.50
Offset:2
Orientation:forward strand
Alignment:TKCAGSCTGAACA
--GAGSCCGAGC-
 A C G T A C G T A G T C C G T A A C T G A T G C A G T C A C G T A C T G G T C A C G T A A T G C C G T A
A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.49
Offset:4
Orientation:forward strand
Alignment:TKCAGSCTGAACA-
----CCAGGAACAG
 A C G T A C G T A G T C C G T A A C T G A T G C A G T C A C G T A C T G G T C A C G T A A T G C C G T A A C G T
A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.49
Offset:3
Orientation:forward strand
Alignment:TKCAGSCTGAACA
---WDNCTGGGCA
 A C G T A C G T A G T C C G T A A C T G A T G C A G T C A C G T A C T G G T C A C G T A A T G C C G T A
A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

Pax6/MA0069.1/Jaspar

Match Rank:7
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---TKCAGSCTGAACA
AANTCATGCGTGAA--
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A T G C A G T C A C G T A C T G G T C A C G T A A T G C C G T A
G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:8
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:TKCAGSCTGAACA
--NNNANTGA---
 A C G T A C G T A G T C C G T A A C T G A T G C A G T C A C G T A C T G G T C A C G T A A T G C C G T A
A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.48
Offset:2
Orientation:forward strand
Alignment:TKCAGSCTGAACA
--CCTGCTGAGH-
 A C G T A C G T A G T C C G T A A C T G A T G C A G T C A C G T A C T G G T C A C G T A A T G C C G T A
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:10
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:TKCAGSCTGAACA---
-NCWRWGTAAACANSV
 A C G T A C G T A G T C C G T A A C T G A T G C A G T C A C G T A C T G G T C A C G T A A T G C C G T A A C G T A C G T A C G T
A C G T T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G