Information for 7-TCCAGVGACACAAAAA (Motif 8)

A G C T A G T C A G T C C T G A A C T G T A C G C T A G C T G A A G T C G T C A A G T C C G T A C T G A C G T A C T G A G T C A
Reverse Opposite:
A C G T A G C T A C G T A G C T A C G T C T A G C A G T C T A G A G C T A G T C A G T C A G T C A G C T C T A G A C T G C T G A
p-value:1e-12
log p-value:-2.915e+01
Information Content per bp:1.801
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif11.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets42.2 +/- 17.8bp
Average Position of motif in Background46.3 +/- 19.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0005.1_Forkhead_class/Jaspar

Match Rank:1
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:TCCAGVGACACAAAAA
-------AAATAAACA
 A G C T A G T C A G T C C T G A A C T G T A C G C T A G C T G A A G T C G T C A A G T C C G T A C T G A C G T A C T G A G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A

PB0166.1_Sox12_2/Jaspar

Match Rank:2
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TCCAGVGACACAAAAA---
---AAACAGACAAAGGAAT
 A G C T A G T C A G T C C T G A A C T G T A C G C T A G C T G A A G T C G T C A A G T C C G T A C T G A C G T A C T G A G T C A A C G T A C G T A C G T
A C G T A C G T A C G T T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:3
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------TCCAGVGACACAAAAA
NNNCTTTCCAGGAAA-------
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C A G T C C T G A A C T G T A C G C T A G C T G A A G T C G T C A A G T C C G T A C T G A C G T A C T G A G T C A
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:TCCAGVGACACAAAAA
------AAAACAAAGG
 A G C T A G T C A G T C C T G A A C T G T A C G C T A G C T G A A G T C G T C A A G T C C G T A C T G A C G T A C T G A G T C A
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

Bcl6/MA0463.1/Jaspar

Match Rank:5
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----TCCAGVGACACAAAAA
NGCTTTCTAGGAAN-------
 A C G T A C G T A C G T A C G T A C G T A G C T A G T C A G T C C T G A A C T G T A C G C T A G C T G A A G T C G T C A A G T C C G T A C T G A C G T A C T G A G T C A
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.51
Offset:1
Orientation:forward strand
Alignment:TCCAGVGACACAAAAA-
-CGAAGCACACAAAATA
 A G C T A G T C A G T C C T G A A C T G T A C G C T A G C T G A A G T C G T C A A G T C C G T A C T G A C G T A C T G A G T C A A C G T
A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PH0064.1_Hoxb9/Jaspar

Match Rank:7
Score:0.51
Offset:3
Orientation:forward strand
Alignment:TCCAGVGACACAAAAA---
---AGAGCCATAAAATTCG
 A G C T A G T C A G T C C T G A A C T G T A C G C T A G C T G A A G T C G T C A A G T C C G T A C T G A C G T A C T G A G T C A A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--TCCAGVGACACAAAAA
CTTCCNGGAA--------
 A C G T A C G T A G C T A G T C A G T C C T G A A C T G T A C G C T A G C T G A A G T C G T C A A G T C C G T A C T G A C G T A C T G A G T C A
A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

STAT1/MA0137.3/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--TCCAGVGACACAAAAA
TTTCCAGGAAA-------
 A C G T A C G T A G C T A G T C A G T C C T G A A C T G T A C G C T A G C T G A A G T C G T C A A G T C C G T A C T G A C G T A C T G A G T C A
A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:10
Score:0.50
Offset:4
Orientation:forward strand
Alignment:TCCAGVGACACAAAAA
----AAGCCATAAAA-
 A G C T A G T C A G T C C T G A A C T G T A C G C T A G C T G A A G T C G T C A A G T C C G T A C T G A C G T A C T G A G T C A
A C G T A C G T A C G T A C G T T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T