Information for 12-TGGTGGTAGCCAAAWG (Motif 19)

C G A T A C T G T A C G A G C T C T A G C T A G A G C T C T G A T A C G G A T C A T G C C G T A T G C A C G T A C G T A A C T G
Reverse Opposite:
A G T C C G A T A C G T A C G T A C G T A T C G C A T G A G T C A G C T C T G A A G T C A G T C C T G A A G T C A G T C C G T A
p-value:1e-9
log p-value:-2.264e+01
Information Content per bp:1.748
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif9.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets38.1 +/- 23.3bp
Average Position of motif in Background51.6 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGGTGGTAGCCAAAWG
AGGTGNCAGACAG---
 C G A T A C T G T A C G A G C T C T A G C T A G A G C T C T G A T A C G G A T C A T G C C G T A T G C A C G T A C G T A A C T G
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGGTGGTAGCCAAAWG
NTCGGTGGTCGC------
 A C G T A C G T C G A T A C T G T A C G A G C T C T A G C T A G A G C T C T G A T A C G G A T C A T G C C G T A T G C A C G T A C G T A A C T G
A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer

Match Rank:3
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TGGTGGTAGCCAAAWG-
NVCAKCTGGNNNCCAGMTGB
 A C G T A C G T A C G T C G A T A C T G T A C G A G C T C T A G C T A G A G C T C T G A T A C G G A T C A T G C C G T A T G C A C G T A C G T A A C T G A C G T
T A C G T G A C T G A C C G T A A C T G T A G C C G A T A C T G A T C G A G C T A T G C T C G A T A G C G T A C C G T A A C T G T G A C G C A T A C T G A C T G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TGGTGGTAGCCAAAWG
AGGTGHCAGACA----
 C G A T A C T G T A C G A G C T C T A G C T A G A G C T C T G A T A C G G A T C A T G C C G T A T G C A C G T A C G T A A C T G
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:5
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TGGTGGTAGCCAAAWG
NNANTGGTGGTCTTNNN---
 A C G T A C G T A C G T A C G T C G A T A C T G T A C G A G C T C T A G C T A G A G C T C T G A T A C G G A T C A T G C C G T A T G C A C G T A C G T A A C T G
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G A C G T A C G T A C G T

ZBTB7B/MA0694.1/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TGGTGGTAGCCAAAWG
TTCGGTGGTCGC------
 A C G T A C G T C G A T A C T G T A C G A G C T C T A G C T A G A G C T C T G A T A C G G A T C A T G C C G T A T G C A C G T A C G T A A C T G
C A G T C G A T A G T C C T A G C A T G C A G T A T C G A C T G C A G T G A T C A T C G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

ZBTB7A/MA0750.1/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TGGTGGTAGCCAAAWG
TCGGTGGTCGCN-----
 A C G T C G A T A C T G T A C G A G C T C T A G C T A G A G C T C T G A T A C G G A T C A T G C C G T A T G C A C G T A C G T A A C T G
A C G T G T A C C A T G A C T G C A G T T A C G C T A G C A G T A G T C A T C G A G T C T G A C A C G T A C G T A C G T A C G T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:8
Score:0.51
Offset:9
Orientation:reverse strand
Alignment:TGGTGGTAGCCAAAWG---
---------NNATAAGGNN
 C G A T A C T G T A C G A G C T C T A G C T A G A G C T C T G A T A C G G A T C A T G C C G T A T G C A C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.49
Offset:8
Orientation:reverse strand
Alignment:TGGTGGTAGCCAAAWG--
--------GTCACATGAY
 C G A T A C T G T A C G A G C T C T A G C T A G A G C T C T G A T A C G G A T C A T G C C G T A T G C A C G T A C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

Twist2/MA0633.1/Jaspar

Match Rank:10
Score:0.49
Offset:8
Orientation:forward strand
Alignment:TGGTGGTAGCCAAAWG--
--------ACCATATGTT
 C G A T A C T G T A C G A G C T C T A G C T A G A G C T C T G A T A C G G A T C A T G C C G T A T G C A C G T A C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T