Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer | 1e-108 | -2.502e+02 | 0.0000 | 160.0 | 18.56% | 807.0 | 1.74% | motif file (matrix) |
svg |
2 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-74 | -1.717e+02 | 0.0000 | 306.0 | 35.50% | 5346.8 | 11.53% | motif file (matrix) |
svg |
3 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-65 | -1.507e+02 | 0.0000 | 478.0 | 55.45% | 12781.1 | 27.56% | motif file (matrix) |
svg |
4 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-37 | -8.708e+01 | 0.0000 | 126.0 | 14.62% | 1724.1 | 3.72% | motif file (matrix) |
svg |
5 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-32 | -7.396e+01 | 0.0000 | 97.0 | 11.25% | 1204.9 | 2.60% | motif file (matrix) |
svg |
6 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-31 | -7.209e+01 | 0.0000 | 267.0 | 30.97% | 6985.5 | 15.06% | motif file (matrix) |
svg |
7 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-27 | -6.427e+01 | 0.0000 | 76.0 | 8.82% | 849.6 | 1.83% | motif file (matrix) |
svg |
8 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-26 | -6.031e+01 | 0.0000 | 79.0 | 9.16% | 978.1 | 2.11% | motif file (matrix) |
svg |
9 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-18 | -4.306e+01 | 0.0000 | 69.0 | 8.00% | 1025.3 | 2.21% | motif file (matrix) |
svg |
10 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-17 | -3.950e+01 | 0.0000 | 56.0 | 6.50% | 750.6 | 1.62% | motif file (matrix) |
svg |
11 |
| RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-16 | -3.860e+01 | 0.0000 | 35.0 | 4.06% | 293.7 | 0.63% | motif file (matrix) |
svg |
12 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-16 | -3.821e+01 | 0.0000 | 70.0 | 8.12% | 1157.5 | 2.50% | motif file (matrix) |
svg |
13 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-16 | -3.743e+01 | 0.0000 | 37.0 | 4.29% | 344.4 | 0.74% | motif file (matrix) |
svg |
14 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-15 | -3.471e+01 | 0.0000 | 56.0 | 6.50% | 840.5 | 1.81% | motif file (matrix) |
svg |
15 |
| ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-14 | -3.296e+01 | 0.0000 | 45.0 | 5.22% | 586.3 | 1.26% | motif file (matrix) |
svg |
16 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-14 | -3.290e+01 | 0.0000 | 50.0 | 5.80% | 715.2 | 1.54% | motif file (matrix) |
svg |
17 |
| PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer | 1e-12 | -2.929e+01 | 0.0000 | 165.0 | 19.14% | 4970.1 | 10.72% | motif file (matrix) |
svg |
18 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-12 | -2.839e+01 | 0.0000 | 55.0 | 6.38% | 953.4 | 2.06% | motif file (matrix) |
svg |
19 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-11 | -2.742e+01 | 0.0000 | 57.0 | 6.61% | 1038.3 | 2.24% | motif file (matrix) |
svg |
20 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-11 | -2.730e+01 | 0.0000 | 48.0 | 5.57% | 776.0 | 1.67% | motif file (matrix) |
svg |
21 |
| PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer | 1e-11 | -2.694e+01 | 0.0000 | 29.0 | 3.36% | 302.4 | 0.65% | motif file (matrix) |
svg |
22 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-11 | -2.638e+01 | 0.0000 | 49.0 | 5.68% | 826.5 | 1.78% | motif file (matrix) |
svg |
23 |
| AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer | 1e-11 | -2.633e+01 | 0.0000 | 145.0 | 16.82% | 4322.0 | 9.32% | motif file (matrix) |
svg |
24 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-11 | -2.624e+01 | 0.0000 | 54.0 | 6.26% | 978.3 | 2.11% | motif file (matrix) |
svg |
25 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-11 | -2.553e+01 | 0.0000 | 60.0 | 6.96% | 1185.8 | 2.56% | motif file (matrix) |
svg |
26 |
| AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer | 1e-11 | -2.540e+01 | 0.0000 | 120.0 | 13.92% | 3367.5 | 7.26% | motif file (matrix) |
svg |
27 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-11 | -2.538e+01 | 0.0000 | 76.0 | 8.82% | 1725.9 | 3.72% | motif file (matrix) |
svg |
28 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-10 | -2.477e+01 | 0.0000 | 59.0 | 6.84% | 1176.8 | 2.54% | motif file (matrix) |
svg |
29 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-10 | -2.354e+01 | 0.0000 | 35.0 | 4.06% | 499.2 | 1.08% | motif file (matrix) |
svg |
30 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-10 | -2.326e+01 | 0.0000 | 65.0 | 7.54% | 1424.3 | 3.07% | motif file (matrix) |
svg |
31 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-9 | -2.253e+01 | 0.0000 | 34.0 | 3.94% | 492.9 | 1.06% | motif file (matrix) |
svg |
32 |
| GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer | 1e-9 | -2.193e+01 | 0.0000 | 32.0 | 3.71% | 451.5 | 0.97% | motif file (matrix) |
svg |
33 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-9 | -2.167e+01 | 0.0000 | 31.0 | 3.60% | 430.1 | 0.93% | motif file (matrix) |
svg |
34 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-8 | -1.984e+01 | 0.0000 | 22.0 | 2.55% | 242.5 | 0.52% | motif file (matrix) |
svg |
35 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-8 | -1.926e+01 | 0.0000 | 58.0 | 6.73% | 1330.3 | 2.87% | motif file (matrix) |
svg |
36 |
| Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer | 1e-8 | -1.885e+01 | 0.0000 | 80.0 | 9.28% | 2153.7 | 4.64% | motif file (matrix) |
svg |
37 |
| RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-7 | -1.832e+01 | 0.0000 | 14.0 | 1.62% | 100.4 | 0.22% | motif file (matrix) |
svg |
38 |
| SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer | 1e-7 | -1.806e+01 | 0.0000 | 58.0 | 6.73% | 1377.5 | 2.97% | motif file (matrix) |
svg |
39 |
| AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer | 1e-7 | -1.733e+01 | 0.0000 | 293.0 | 33.99% | 11885.1 | 25.63% | motif file (matrix) |
svg |
40 |
| GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-7 | -1.642e+01 | 0.0000 | 30.0 | 3.48% | 513.9 | 1.11% | motif file (matrix) |
svg |
41 |
| GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer | 1e-6 | -1.608e+01 | 0.0000 | 20.0 | 2.32% | 251.9 | 0.54% | motif file (matrix) |
svg |
42 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-6 | -1.565e+01 | 0.0000 | 56.0 | 6.50% | 1407.8 | 3.04% | motif file (matrix) |
svg |
43 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-6 | -1.561e+01 | 0.0000 | 115.0 | 13.34% | 3779.3 | 8.15% | motif file (matrix) |
svg |
44 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-6 | -1.461e+01 | 0.0000 | 90.0 | 10.44% | 2798.3 | 6.03% | motif file (matrix) |
svg |
45 |
| NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-6 | -1.433e+01 | 0.0000 | 9.0 | 1.04% | 50.8 | 0.11% | motif file (matrix) |
svg |
46 |
| CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-6 | -1.391e+01 | 0.0000 | 36.0 | 4.18% | 774.8 | 1.67% | motif file (matrix) |
svg |
47 |
| GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-5 | -1.373e+01 | 0.0000 | 11.0 | 1.28% | 87.5 | 0.19% | motif file (matrix) |
svg |
48 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-5 | -1.271e+01 | 0.0000 | 42.0 | 4.87% | 1028.2 | 2.22% | motif file (matrix) |
svg |
49 |
| Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer | 1e-5 | -1.218e+01 | 0.0000 | 34.0 | 3.94% | 768.4 | 1.66% | motif file (matrix) |
svg |
50 |
| RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer | 1e-4 | -1.096e+01 | 0.0001 | 10.0 | 1.16% | 96.9 | 0.21% | motif file (matrix) |
svg |
51 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.090e+01 | 0.0001 | 11.0 | 1.28% | 118.1 | 0.25% | motif file (matrix) |
svg |
52 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-4 | -1.050e+01 | 0.0002 | 227.0 | 26.33% | 9535.6 | 20.56% | motif file (matrix) |
svg |
53 |
| Sp1(Zf)/Promoter/Homer | 1e-4 | -1.006e+01 | 0.0003 | 28.0 | 3.25% | 641.1 | 1.38% | motif file (matrix) |
svg |
54 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-4 | -9.774e+00 | 0.0004 | 31.0 | 3.60% | 758.0 | 1.63% | motif file (matrix) |
svg |
55 |
| GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-4 | -9.507e+00 | 0.0005 | 11.0 | 1.28% | 138.5 | 0.30% | motif file (matrix) |
svg |
56 |
| Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer | 1e-4 | -9.430e+00 | 0.0005 | 51.0 | 5.92% | 1545.0 | 3.33% | motif file (matrix) |
svg |
57 |
| c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-4 | -9.391e+00 | 0.0005 | 27.0 | 3.13% | 632.3 | 1.36% | motif file (matrix) |
svg |
58 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-4 | -9.332e+00 | 0.0006 | 206.0 | 23.90% | 8677.0 | 18.71% | motif file (matrix) |
svg |
59 |
| KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer | 1e-4 | -9.217e+00 | 0.0006 | 43.0 | 4.99% | 1238.1 | 2.67% | motif file (matrix) |
svg |
60 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-3 | -9.055e+00 | 0.0007 | 24.0 | 2.78% | 541.8 | 1.17% | motif file (matrix) |
svg |
61 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-3 | -8.906e+00 | 0.0008 | 9.0 | 1.04% | 100.8 | 0.22% | motif file (matrix) |
svg |
62 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-3 | -8.506e+00 | 0.0012 | 108.0 | 12.53% | 4114.8 | 8.87% | motif file (matrix) |
svg |
63 |
| E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer | 1e-3 | -8.238e+00 | 0.0015 | 40.0 | 4.64% | 1177.2 | 2.54% | motif file (matrix) |
svg |
64 |
| GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-3 | -7.926e+00 | 0.0021 | 6.0 | 0.70% | 49.9 | 0.11% | motif file (matrix) |
svg |
65 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.892e+00 | 0.0021 | 9.0 | 1.04% | 115.1 | 0.25% | motif file (matrix) |
svg |
66 |
| GFY-Staf(?,Zf)/Promoter/Homer | 1e-3 | -7.830e+00 | 0.0022 | 9.0 | 1.04% | 116.1 | 0.25% | motif file (matrix) |
svg |
67 |
| ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer | 1e-3 | -7.745e+00 | 0.0024 | 119.0 | 13.81% | 4716.1 | 10.17% | motif file (matrix) |
svg |
68 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-3 | -7.735e+00 | 0.0024 | 40.0 | 4.64% | 1209.0 | 2.61% | motif file (matrix) |
svg |
69 |
| Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer | 1e-3 | -7.588e+00 | 0.0027 | 18.0 | 2.09% | 390.8 | 0.84% | motif file (matrix) |
svg |
70 |
| NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer | 1e-3 | -7.583e+00 | 0.0027 | 17.0 | 1.97% | 357.3 | 0.77% | motif file (matrix) |
svg |
71 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-3 | -7.480e+00 | 0.0029 | 129.0 | 14.97% | 5223.2 | 11.26% | motif file (matrix) |
svg |
72 |
| Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer | 1e-3 | -7.463e+00 | 0.0029 | 68.0 | 7.89% | 2417.5 | 5.21% | motif file (matrix) |
svg |
73 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.420e+00 | 0.0030 | 43.0 | 4.99% | 1351.2 | 2.91% | motif file (matrix) |
svg |
74 |
| MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer | 1e-3 | -7.281e+00 | 0.0034 | 28.0 | 3.25% | 763.2 | 1.65% | motif file (matrix) |
svg |
75 |
| RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer | 1e-3 | -7.277e+00 | 0.0034 | 11.0 | 1.28% | 180.3 | 0.39% | motif file (matrix) |
svg |
76 |
| RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-3 | -7.269e+00 | 0.0034 | 87.0 | 10.09% | 3290.5 | 7.10% | motif file (matrix) |
svg |
77 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-3 | -7.245e+00 | 0.0034 | 46.0 | 5.34% | 1488.0 | 3.21% | motif file (matrix) |
svg |
78 |
| ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -6.709e+00 | 0.0057 | 3.0 | 0.35% | 11.9 | 0.03% | motif file (matrix) |
svg |
79 |
| HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer | 1e-2 | -6.704e+00 | 0.0057 | 35.0 | 4.06% | 1072.4 | 2.31% | motif file (matrix) |
svg |
80 |
| ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -6.408e+00 | 0.0075 | 11.0 | 1.28% | 201.4 | 0.43% | motif file (matrix) |
svg |
81 |
| PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer | 1e-2 | -6.404e+00 | 0.0075 | 15.0 | 1.74% | 330.1 | 0.71% | motif file (matrix) |
svg |
82 |
| GFY(?)/Promoter/Homer | 1e-2 | -6.337e+00 | 0.0079 | 9.0 | 1.04% | 144.7 | 0.31% | motif file (matrix) |
svg |
83 |
| Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer | 1e-2 | -6.332e+00 | 0.0079 | 133.0 | 15.43% | 5581.3 | 12.04% | motif file (matrix) |
svg |
84 |
| EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.112e+00 | 0.0096 | 95.0 | 11.02% | 3800.4 | 8.20% | motif file (matrix) |
svg |
85 |
| Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer | 1e-2 | -6.067e+00 | 0.0099 | 31.0 | 3.60% | 951.2 | 2.05% | motif file (matrix) |
svg |
86 |
| ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer | 1e-2 | -6.000e+00 | 0.0105 | 180.0 | 20.88% | 7945.6 | 17.13% | motif file (matrix) |
svg |
87 |
| E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.858e+00 | 0.0120 | 33.0 | 3.83% | 1047.9 | 2.26% | motif file (matrix) |
svg |
88 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -5.834e+00 | 0.0121 | 143.0 | 16.59% | 6148.3 | 13.26% | motif file (matrix) |
svg |
89 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-2 | -5.622e+00 | 0.0148 | 24.0 | 2.78% | 698.9 | 1.51% | motif file (matrix) |
svg |
90 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-2 | -5.400e+00 | 0.0183 | 62.0 | 7.19% | 2359.0 | 5.09% | motif file (matrix) |
svg |
91 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-2 | -5.357e+00 | 0.0189 | 67.0 | 7.77% | 2592.9 | 5.59% | motif file (matrix) |
svg |
92 |
| Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer | 1e-2 | -5.177e+00 | 0.0223 | 6.0 | 0.70% | 85.7 | 0.18% | motif file (matrix) |
svg |
93 |
| NRF(NRF)/Promoter/Homer | 1e-2 | -4.883e+00 | 0.0296 | 17.0 | 1.97% | 466.4 | 1.01% | motif file (matrix) |
svg |
94 |
| Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer | 1e-2 | -4.790e+00 | 0.0322 | 32.0 | 3.71% | 1085.9 | 2.34% | motif file (matrix) |
svg |