Information for 5-AGGTCAGATC (Motif 8)

C T G A T C A G A T C G C A G T A T G C C G T A T A C G G C T A G C A T T G A C
Reverse Opposite:
A C T G C G T A C G A T A T G C C G A T T A C G G T C A T A G C A G T C G A C T
p-value:1e-11
log p-value:-2.585e+01
Information Content per bp:1.665
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif6.03%
Number of Background Sequences with motif928.8
Percentage of Background Sequences with motif2.00%
Average Position of motif in Targets56.1 +/- 27.1bp
Average Position of motif in Background49.7 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AGGTCAGATC
TRAGGTCA----
 A C G T A C G T C T G A T C A G A T C G C A G T A T G C C G T A T A C G G C T A G C A T T G A C
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AGGTCAGATC
AGGTCA----
 C T G A T C A G A T C G C A G T A T G C C G T A T A C G G C T A G C A T T G A C
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----AGGTCAGATC
ATCAAGGTCA----
 A C G T A C G T A C G T A C G T C T G A T C A G A T C G C A G T A T G C C G T A T A C G G C T A G C A T T G A C
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AGGTCAGATC
AGRGGTCA----
 A C G T A C G T C T G A T C A G A T C G C A G T A T G C C G T A T A C G G C T A G C A T T G A C
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AGGTCAGATC
CAAAGGTCAG---
 A C G T A C G T A C G T C T G A T C A G A T C G C A G T A T G C C G T A T A C G G C T A G C A T T G A C
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AGGTCAGATC
AAGGTCAC---
 A C G T C T G A T C A G A T C G C A G T A T G C C G T A T A C G G C T A G C A T T G A C
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---AGGTCAGATC
TCAAGGTCAN---
 A C G T A C G T A C G T C T G A T C A G A T C G C A G T A T G C C G T A T A C G G C T A G C A T T G A C
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGGTCAGATC------
AAGGCCAGATGGTCCGG
 A C G T C T G A T C A G A T C G C A G T A T G C C G T A T A C G G C T A G C A T T G A C A C G T A C G T A C G T A C G T A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AGGTCAGATC
AAYTAGGTCA----
 A C G T A C G T A C G T A C G T C T G A T C A G A T C G C A G T A T G C C G T A T A C G G C T A G C A T T G A C
G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGGTCAGATC
ATGCCAGACN
 C T G A T C A G A T C G C A G T A T G C C G T A T A C G G C T A G C A T T G A C
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C