Information for 4-ACAGDGTGCTCATCAG (Motif 20)

C G T A A G T C C G T A T C A G C A G T A T C G C G A T A T C G A T G C A C G T A G T C C G T A A G C T A T G C C G T A A C T G
Reverse Opposite:
A G T C A C G T A T C G C T G A C G A T A C T G C G T A A T C G A T G C C G T A A T G C G C T A A G T C A C G T A C T G C G A T
p-value:1e-8
log p-value:-1.928e+01
Information Content per bp:1.805
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets67.4 +/- 19.9bp
Average Position of motif in Background59.1 +/- 12.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ACAGDGTGCTCATCAG
ACAAAGGNBCCT----
 C G T A A G T C C G T A T C A G C A G T A T C G C G A T A T C G A T G C A C G T A G T C C G T A A G C T A T G C C G T A A C T G
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T A C G T A C G T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ACAGDGTGCTCATCAG
-CAGTGTGGTCGC---
 C G T A A G T C C G T A T C A G C A G T A T C G C G A T A T C G A T G C A C G T A G T C C G T A A G C T A T G C C G T A A C T G
A C G T G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C A C G T A C G T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:3
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ACAGDGTGCTCATCAG
GVACAGNMTGTYCTB---
 A C G T A C G T C G T A A G T C C G T A T C A G C A G T A T C G C G A T A T C G A T G C A C G T A G T C C G T A A G C T A T G C C G T A A C T G
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ACAGDGTGCTCATCAG
ACAAAG----------
 C G T A A G T C C G T A T C A G C A G T A T C G C G A T A T C G A T G C A C G T A G T C C G T A A G C T A T G C C G T A A C T G
G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-ACAGDGTGCTCATCAG
CGAACAGTGCTCACTAT
 A C G T C G T A A G T C C G T A T C A G C A G T A T C G C G A T A T C G A T G C A C G T A G T C C G T A A G C T A T G C C G T A A C T G
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--ACAGDGTGCTCATCAG
GAACADWATGTTCTT---
 A C G T A C G T C G T A A G T C C G T A T C A G C A G T A T C G C G A T A T C G A T G C A C G T A G T C C G T A A G C T A T G C C G T A A C T G
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T A C G T A C G T A C G T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---ACAGDGTGCTCATCAG
AGNACAGNCTGTTCTN---
 A C G T A C G T A C G T C G T A A G T C C G T A T C A G C A G T A T C G C G A T A T C G A T G C A C G T A G T C C G T A A G C T A T G C C G T A A C T G
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T A C G T A C G T A C G T

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:ACAGDGTGCTCATCAG
---ATGACGTCATCN-
 C G T A A G T C C G T A T C A G C A G T A T C G C G A T A T C G A T G C A C G T A G T C C G T A A G C T A T G C C G T A A C T G
A C G T A C G T A C G T T C G A G C A T A C T G C T G A A G T C T C A G G A C T G T A C C G T A A G C T A G T C G A T C A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--ACAGDGTGCTCATCAG
GRACAGWMTGTYCTB---
 A C G T A C G T C G T A A G T C C G T A T C A G C A G T A T C G C G A T A T C G A T G C A C G T A G T C C G T A A G C T A T G C C G T A A C T G
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G A C G T A C G T A C G T

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:10
Score:0.51
Offset:3
Orientation:forward strand
Alignment:ACAGDGTGCTCATCAG
---ATGACGTCATCN-
 C G T A A G T C C G T A T C A G C A G T A T C G C G A T A T C G A T G C A C G T A G T C C G T A A G C T A T G C C G T A A C T G
A C G T A C G T A C G T T C G A A C G T A C T G C T G A A G T C T C A G A G C T G T A C C G T A A G C T G A T C T C G A A C G T