Information for 10-AGGTGACCGA (Motif 14)

C G T A A C T G A T C G A C G T A C T G C T G A A T G C G T A C T C A G T G C A
Reverse Opposite:
A C G T A G T C A C T G A T C G A G C T A G T C C G T A A T G C A G T C C G A T
p-value:1e-9
log p-value:-2.160e+01
Information Content per bp:1.848
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.97%
Number of Background Sequences with motif124.0
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets50.5 +/- 24.0bp
Average Position of motif in Background50.5 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF1/MA0093.2/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AGGTGACCGA
GCCACGTGACC--
 A C G T A C G T A C G T C G T A A C T G A T C G A C G T A C T G C T G A A T G C G T A C T C A G T G C A
T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AGGTGACCGA
GTCATGTGACC--
 A C G T A C G T A C G T C G T A A C T G A T C G A C G T A C T G C T G A A T G C G T A C T C A G T G C A
T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AGGTGACCGA---
AGGTGNCAGACAG
 C G T A A C T G A T C G A C G T A C T G C T G A A T G C G T A C T C A G T G C A A C G T A C G T A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---AGGTGACCGA
NNCAGGTGNN---
 A C G T A C G T A C G T C G T A A C T G A T C G A C G T A C T G C T G A A T G C G T A C T C A G T G C A
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGGTGACCGA
AGGTGTCA--
 C G T A A C T G A T C G A C G T A C T G C T G A A T G C G T A C T C A G T G C A
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGGTGACCGA--
AGGTGHCAGACA
 C G T A A C T G A T C G A C G T A C T G C T G A A T G C G T A C T C A G T G C A A C G T A C G T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

E-box(bHLH)/Promoter/Homer

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AGGTGACCGA
TCACGTGACCGG
 A C G T A C G T C G T A A C T G A T C G A C G T A C T G C T G A A T G C G T A C T C A G T G C A
A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:AGGTGACCGA
---TGACCT-
 C G T A A C T G A T C G A C G T A C T G C T G A A T G C G T A C T C A G T G C A
A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGGTGACCGA
CAGGTGAGG--
 A C G T C G T A A C T G A T C G A C G T A C T G C T G A A T G C G T A C T C A G T G C A
A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AGGTGACCGA
VCAGGTRDRY--
 A C G T A C G T C G T A A C T G A T C G A C G T A C T G C T G A A T G C G T A C T C A G T G C A
T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T A C G T