Information for 7-TGCCCAGCCA (Motif 12)

C A G T A C T G G T A C A G T C T A G C C G T A C T A G G T A C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G G A T C A C G T A T C G A C T G A C T G A G T C G T C A
p-value:1e-10
log p-value:-2.313e+01
Information Content per bp:1.855
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.78%
Number of Background Sequences with motif243.9
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets58.0 +/- 24.1bp
Average Position of motif in Background50.5 +/- 36.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:TGCCCAGCCA
TGCCCAGNHW
 C A G T A C T G G T A C A G T C T A G C C G T A C T A G G T A C A G T C C G T A
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TGCCCAGCCA
ATGCCCACC--
 A C G T C A G T A C T G G T A C A G T C T A G C C G T A C T A G G T A C A G T C C G T A
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TGCCCAGCCA----
ANNTNCCCACCCANNAC
 A C G T A C G T A C G T C A G T A C T G G T A C A G T C T A G C C G T A C T A G G T A C A G T C C G T A A C G T A C G T A C G T A C G T
G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C

PB0133.1_Hic1_2/Jaspar

Match Rank:4
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----TGCCCAGCCA-
GGGTGTGCCCAAAAGG
 A C G T A C G T A C G T A C G T A C G T C A G T A C T G G T A C A G T C T A G C C G T A C T A G G T A C A G T C C G T A A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGCCCAGCCA--
GGACCACCCACG
 C A G T A C T G G T A C A G T C T A G C C G T A C T A G G T A C A G T C C G T A A C G T A C G T
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TGCCCAGCCA-
ACATGCCCGGGCAT
 A C G T A C G T A C G T C A G T A C T G G T A C A G T C T A G C C G T A C T A G G T A C A G T C C G T A A C G T
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TGCCCAGCCA-
---BCAGACWA
 C A G T A C T G G T A C A G T C T A G C C G T A C T A G G T A C A G T C C G T A A C G T
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGCCCAGCCA
GGTGCCAAGT--
 A C G T A C G T C A G T A C T G G T A C A G T C T A G C C G T A C T A G G T A C A G T C C G T A
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T

Nfe2l2/MA0150.2/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGCCCAGCCA-----
TGCTGAGTCATNNTG
 C A G T A C T G G T A C A G T C T A G C C G T A C T A G G T A C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G C A T A T C G A T G C G A C T C T A G C G T A T A C G A C G T G T A C C G T A A G C T A C T G A T G C G A C T C A T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TGCCCAGCCA-
---CCAGACAG
 C A G T A C T G G T A C A G T C T A G C C G T A C T A G G T A C A G T C C G T A A C G T
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G