Information for 4-CTGCCCTGGC (Motif 8)

A G T C G C A T A T C G T G A C A G T C G T A C C G A T A T C G A T C G A T G C
Reverse Opposite:
T A C G T A G C T A G C G C T A C A T G T C A G A C T G A T G C C G T A C T A G
p-value:1e-12
log p-value:-2.900e+01
Information Content per bp:1.688
Number of Target Sequences with motif119.0
Percentage of Target Sequences with motif20.91%
Number of Background Sequences with motif2457.6
Percentage of Background Sequences with motif10.49%
Average Position of motif in Targets49.3 +/- 26.7bp
Average Position of motif in Background49.5 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:CTGCCCTGGC-
-TGCCCAGNHW
 A G T C G C A T A T C G T G A C A G T C G T A C C G A T A T C G A T C G A T G C A C G T
A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CTGCCCTGGC----
ATGCCCGGGCATGT
 A G T C G C A T A T C G T G A C A G T C G T A C C G A T A T C G A T C G A T G C A C G T A C G T A C G T A C G T
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T

HIC2/MA0738.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CTGCCCTGGC
ATGCCCACC-
 A G T C G C A T A T C G T G A C A G T C G T A C C G A T A T C G A T C G A T G C
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T

THAP1/MA0597.1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CTGCCCTGGC
CTGCCCGCA-
 A G T C G C A T A T C G T G A C A G T C G T A C C G A T A T C G A T C G A T G C
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CTGCCCTGGC--
NGTTGCCATGGCAA
 A C G T A C G T A G T C G C A T A T C G T G A C A G T C G T A C C G A T A T C G A T C G A T G C A C G T A C G T
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTGCCCTGGC
-TGACCTYA-
 A G T C G C A T A T C G T G A C A G T C G T A C C G A T A T C G A T C G A T G C
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CTGCCCTGGC--
GGGTGTGCCCAAAAGG
 A C G T A C G T A C G T A C G T A G T C G C A T A T C G T G A C A G T C G T A C C G A T A T C G A T C G A T G C A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTGCCCTGGC
-TGACCT---
 A G T C G C A T A T C G T G A C A G T C G T A C C G A T A T C G A T C G A T G C
A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTGCCCTGGC--
GGTTGCCATGGCAA
 A C G T A C G T A G T C G C A T A T C G T G A C A G T C G T A C C G A T A T C G A T C G A T G C A C G T A C G T
C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

PB0153.1_Nr2f2_2/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CTGCCCTGGC---
NNNNTGACCCGGCGCG
 A C G T A C G T A C G T A G T C G C A T A T C G T G A C A G T C G T A C C G A T A T C G A T C G A T G C A C G T A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G