Information for 7-TGRCCSAACA (Motif 17)

A C G T C T A G C T A G A G T C A G T C A T G C C G T A G T C A G T A C T C G A
Reverse Opposite:
A G C T A C T G A C G T A C G T A T C G A C T G C T A G A G T C A G T C G T C A
p-value:1e-4
log p-value:-1.027e+01
Information Content per bp:1.722
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.46%
Number of Background Sequences with motif154.0
Percentage of Background Sequences with motif0.66%
Average Position of motif in Targets49.9 +/- 26.6bp
Average Position of motif in Background51.8 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGRCCSAACA
TGACCT----
 A C G T C T A G C T A G A G T C A G T C A T G C C G T A G T C A G T A C T C G A
A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TGRCCSAACA--
NNCNTGACCCCGCTCT
 A C G T A C G T A C G T A C G T A C G T C T A G C T A G A G T C A G T C A T G C C G T A G T C A G T A C T C G A A C G T A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

ZNF354C/MA0130.1/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TGRCCSAACA
--ATCCAC--
 A C G T C T A G C T A G A G T C A G T C A T G C C G T A G T C A G T A C T C G A
A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TGRCCSAACA--
NNNNTGACCCGGCGCG
 A C G T A C G T A C G T A C G T A C G T C T A G C T A G A G T C A G T C A T G C C G T A G T C A G T A C T C G A A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGRCCSAACA
TGACCTARTT
 A C G T C T A G C T A G A G T C A G T C A T G C C G T A G T C A G T A C T C G A
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGRCCSAACA
TGGGGCCCAC--
 A C G T A C G T A C G T C T A G C T A G A G T C A G T C A T G C C G T A G T C A G T A C T C G A
G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGRCCSAACA---
TTGACCTANTTATN
 A C G T A C G T C T A G C T A G A G T C A G T C A T G C C G T A G T C A G T A C T C G A A C G T A C G T A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

PB0133.1_Hic1_2/Jaspar

Match Rank:8
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----TGRCCSAACA-
GGGTGTGCCCAAAAGG
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T A G A G T C A G T C A T G C C G T A G T C A G T A C T C G A A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

POL004.1_CCAAT-box/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TGRCCSAACA
ACTAGCCAATCA
 A C G T A C G T A C G T C T A G C T A G A G T C A G T C A T G C C G T A G T C A G T A C T C G A
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

PB0036.1_Irf6_1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGRCCSAACA------
CTGATCGAAACCAAAGT
 A C G T A C G T C T A G C T A G A G T C A G T C A T G C C G T A G T C A G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T