Information for 5-AGGCATTGGCTTGTGC (Motif 9)

C G T A A T C G A C T G G T A C C G T A A C G T A C G T A C T G T A C G A G T C A G C T A C G T A C T G A C G T A C T G G T A C
Reverse Opposite:
A C T G A G T C C G T A G T A C C G T A C T G A A C T G A T G C A G T C C G T A G T C A A C G T A C T G A G T C A T G C A C G T
p-value:1e-10
log p-value:-2.495e+01
Information Content per bp:1.912
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.8 +/- 19.1bp
Average Position of motif in Background55.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:AGGCATTGGCTTGTGC
-----TTGACTTTT--
 C G T A A T C G A C T G G T A C C G T A A C G T A C G T A C T G T A C G A G T C A G C T A C G T A C T G A C G T A C T G G T A C
A C G T A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AGGCATTGGCTTGTGC
-CCGATTGGCT-----
 C G T A A T C G A C T G G T A C C G T A A C G T A C G T A C T G T A C G A G T C A G C T A C G T A C T G A C G T A C T G G T A C
A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AGGCATTGGCTTGTGC
--TGATTGGCTANN--
 C G T A A T C G A C T G G T A C C G T A A C G T A C G T A C T G T A C G A G T C A G C T A C G T A C T G A C G T A C T G G T A C
A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T A C G T

MTF1/MA0863.1/Jaspar

Match Rank:4
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:AGGCATTGGCTTGTGC---
-----GTGCCGTGTGCAAA
 C G T A A T C G A C T G G T A C C G T A A C G T A C G T A C T G T A C G A G T C A G C T A C G T A C T G A C G T A C T G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

HES7/MA0822.1/Jaspar

Match Rank:5
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:AGGCATTGGCTTGTGC--
------TGGCACGTGCCA
 C G T A A T C G A C T G G T A C C G T A A C G T A C G T A C T G T A C G A G T C A G C T A C G T A C T G A C G T A C T G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A C G C T A G A G T C C G T A A G T C A C T G A G C T C T A G A G T C A G T C C T G A

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AGGCATTGGCTTGTGC
ATGCCCGGGCATGT--
 C G T A A T C G A C T G G T A C C G T A A C G T A C G T A C T G T A C G A G T C A G C T A C G T A C T G A C G T A C T G G T A C
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--AGGCATTGGCTTGTGC
AGAGGAAGTG--------
 A C G T A C G T C G T A A T C G A C T G G T A C C G T A A C G T A C G T A C T G T A C G A G T C A G C T A C G T A C T G A C G T A C T G G T A C
C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.50
Offset:5
Orientation:forward strand
Alignment:AGGCATTGGCTTGTGC
-----TTGGCA-----
 C G T A A T C G A C T G G T A C C G T A A C G T A C G T A C T G T A C G A G T C A G C T A C G T A C T G A C G T A C T G G T A C
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--AGGCATTGGCTTGTGC
ACAGGATGTGGT------
 A C G T A C G T C G T A A T C G A C T G G T A C C G T A A C G T A C G T A C T G T A C G A G T C A G C T A C G T A C T G A C G T A C T G G T A C
T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-AGGCATTGGCTTGTGC
CAGGCCNNGGCCNN---
 A C G T C G T A A T C G A C T G G T A C C G T A A C G T A C G T A C T G T A C G A G T C A G C T A C G T A C T G A C G T A C T G G T A C
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C A C G T A C G T A C G T