Information for 3-TGACCCAGGTTGTTCA (Motif 6)

C A G T A T C G T C G A A T G C G A T C A G T C C G T A C T A G A T C G A C G T G A C T C T A G A G C T A G C T T A G C T G C A
Reverse Opposite:
A C G T A T C G T C G A C T G A G A T C C G T A T G C A T A G C A G T C C G A T A C T G C A T G A T C G A C G T A T G C G C T A
p-value:1e-13
log p-value:-3.153e+01
Information Content per bp:1.642
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.16%
Number of Background Sequences with motif80.4
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets44.1 +/- 27.8bp
Average Position of motif in Background48.9 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGACCCAGGTTGTTCA
TGACCTARTT------
 C A G T A T C G T C G A A T G C G A T C A G T C C G T A C T A G A T C G A C G T G A C T C T A G A G C T A G C T T A G C T G C A
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGACCCAGGTTGTTCA
TTGACCTANTTATN---
 A C G T C A G T A T C G T C G A A T G C G A T C A G T C C G T A C T A G A T C G A C G T G A C T C T A G A G C T A G C T T A G C T G C A
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A A C G T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TGACCCAGGTTGTTCA
NNNNTGACCCGGCGCG----
 A C G T A C G T A C G T A C G T C A G T A T C G T C G A A T G C G A T C A G T C C G T A C T A G A T C G A C G T G A C T C T A G A G C T A G C T T A G C T G C A
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G A C G T A C G T A C G T A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGACCCAGGTTGTTCA
TGACTCA---------
 C A G T A T C G T C G A A T G C G A T C A G T C C G T A C T A G A T C G A C G T G A C T C T A G A G C T A G C T T A G C T G C A
A G C T A C T G G T C A T G A C C G A T A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TGACCCAGGTTGTTCA
NNCNTGACCCCGCTCT----
 A C G T A C G T A C G T A C G T C A G T A T C G T C G A A T G C G A T C A G T C C G T A C T A G A T C G A C G T G A C T C T A G A G C T A G C T T A G C T G C A
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T A C G T A C G T A C G T A C G T

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGACCCAGGTTGTTCA
TGACTCAGCA------
 C A G T A T C G T C G A A T G C G A T C A G T C C G T A C T A G A T C G A C G T G A C T C T A G A G C T A G C T T A G C T G C A
A G C T A C T G C G T A A T G C C G A T G T A C C T G A A C T G A T G C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

MAF::NFE2/MA0501.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGACCCAGGTTGTTCA
ATGACTCAGCAATTT--
 A C G T C A G T A T C G T C G A A T G C G A T C A G T C C G T A C T A G A T C G A C G T G A C T C T A G A G C T A G C T T A G C T G C A
T C G A A C G T A C T G C G T A A T G C C G A T G T A C C G T A C A T G A T G C C T G A C T G A C G A T G C A T G A C T A C G T A C G T

Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGACCCAGGTTGTTCA
ATGACTCAGCANWWT--
 A C G T C A G T A T C G T C G A A T G C G A T C A G T C C G T A C T A G A T C G A C G T G A C T C T A G A G C T A G C T T A G C T G C A
T C G A A C G T A C T G C G T A T A G C G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T A C G T A C G T

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGACCCAGGTTGTTCA
ATGACTCATC-------
 A C G T C A G T A T C G T C G A A T G C G A T C A G T C C G T A C T A G A T C G A C G T G A C T C T A G A G C T A G C T T A G C T G C A
T C G A A C G T C A T G G C T A T A G C C G A T G T A C G C T A A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOSL1/MA0477.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGACCCAGGTTGTTCA
GGTGACTCATG-------
 A C G T A C G T C A G T A T C G T C G A A T G C G A T C A G T C C G T A C T A G A T C G A C G T G A C T C T A G A G C T A G C T T A G C T G C A
C T A G T C A G A C G T A C T G C G T A T A G C A C G T G T A C C G T A A C G T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T