Information for 2-GCTGCAGGTCAGCTGA (Motif 5)

C T A G A T G C C G A T A T C G A G T C T C G A A C T G A C T G A G C T A G T C C G T A A C T G A G T C A C G T A C T G T C G A
Reverse Opposite:
A C G T T A G C G T C A C T A G A G T C A C G T A C T G C T G A A G T C A G T C A G C T C T A G A T G C C G T A A T C G A G T C
p-value:1e-15
log p-value:-3.676e+01
Information Content per bp:1.770
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.0 +/- 21.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:1
Score:0.68
Offset:5
Orientation:forward strand
Alignment:GCTGCAGGTCAGCTGA
-----AGGTCA-----
 C T A G A T G C C G A T A T C G A G T C T C G A A C T G A C T G A G C T A G T C C G T A A C T G A G T C A C G T A C T G T C G A
A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:2
Score:0.64
Offset:7
Orientation:reverse strand
Alignment:GCTGCAGGTCAGCTGA--
-------GTCAGCANNTN
 C T A G A T G C C G A T A T C G A G T C T C G A A C T G A C T G A G C T A G T C C G T A A C T G A G T C A C G T A C T G T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

RORA/MA0071.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GCTGCAGGTCAGCTGA
-ATCAAGGTCA-----
 C T A G A T G C C G A T A T C G A G T C T C G A A C T G A C T G A G C T A G T C C G T A A C T G A G T C A C G T A C T G T C G A
A C G T C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCTGCAGGTCAGCTGA
CGCGCCGGGTCACGTA-
 A C G T C T A G A T G C C G A T A T C G A G T C T C G A A C T G A C T G A G C T A G T C C G T A A C T G A G T C A C G T A C T G T C G A
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GCTGCAGGTCAGCTGA
---TRAGGTCA-----
 C T A G A T G C C G A T A T C G A G T C T C G A A C T G A C T G A G C T A G T C C G T A A C T G A G T C A C G T A C T G T C G A
A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCTGCAGGTCAGCTGA
AAGTTCAAGGTCAGC---
 A C G T A C G T C T A G A T G C C G A T A T C G A G T C T C G A A C T G A C T G A G C T A G T C C G T A A C T G A G T C A C G T A C T G T C G A
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:7
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GCTGCAGGTCAGCTGA
---AGRGGTCA-----
 C T A G A T G C C G A T A T C G A G T C T C G A A C T G A C T G A G C T A G T C C G T A A C T G A G T C A C G T A C T G T C G A
A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GCTGCAGGTCAGCTGA
----TGAGTCAGCA--
 C T A G A T G C C G A T A T C G A G T C T C G A A C T G A C T G A G C T A G T C C G T A A C T G A G T C A C G T A C T G T C G A
A C G T A C G T A C G T A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCTGCAGGTCAGCTGA
--TCAAGGTCAN----
 C T A G A T G C C G A T A T C G A G T C T C G A A C T G A C T G A G C T A G T C C G T A A C T G A G T C A C G T A C T G T C G A
A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:10
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GCTGCAGGTCAGCTGA
----AAGGTCAC----
 C T A G A T G C C G A T A T C G A G T C T C G A A C T G A C T G A G C T A G T C C G T A A C T G A G T C A C G T A C T G T C G A
A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T