Information for 3-ATGACCTTAG (Motif 3)

C T G A C G A T T A C G T G C A G A T C G T A C A G C T C G A T T C G A A T C G
Reverse Opposite:
T A G C A G C T G C T A T C G A A C T G C T A G A C G T A T G C G C T A G A C T
p-value:1e-20
log p-value:-4.807e+01
Information Content per bp:1.689
Number of Target Sequences with motif58.0
Percentage of Target Sequences with motif6.95%
Number of Background Sequences with motif693.7
Percentage of Background Sequences with motif1.48%
Average Position of motif in Targets48.7 +/- 23.3bp
Average Position of motif in Background50.3 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrrg/MA0643.1/Jaspar

Match Rank:1
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:ATGACCTTAG
ATGACCTTGA
 C T G A C G A T T A C G T G C A G A T C G T A C A G C T C G A T T C G A A T C G
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

PB0014.1_Esrra_1/Jaspar

Match Rank:2
Score:0.82
Offset:-4
Orientation:reverse strand
Alignment:----ATGACCTTAG---
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A C G T C T G A C G A T T A C G T G C A G A T C G T A C A G C T C G A T T C G A A T C G A C G T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:ATGACCTTAG
-TGACCTYA-
 C T G A C G A T T A C G T G C A G A T C G T A C A G C T C G A T T C G A A T C G
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.81
Offset:0
Orientation:forward strand
Alignment:ATGACCTTAG
NTGACCTTGA
 C T G A C G A T T A C G T G C A G A T C G T A C A G C T C G A T T C G A A T C G
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:ATGACCTTAG
CTGACCTTTG
 C T G A C G A T T A C G T G C A G A T C G T A C A G C T C G A T T C G A A T C G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

ESRRB/MA0141.3/Jaspar

Match Rank:6
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-ATGACCTTAG
NATGACCTTGA
 A C G T C T G A C G A T T A C G T G C A G A T C G T A C A G C T C G A T T C G A A T C G
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:7
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---ATGACCTTAG---
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T C T G A C G A T T A C G T G C A G A T C G T A C A G C T C G A T T C G A A T C G A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

PB0053.1_Rara_1/Jaspar

Match Rank:8
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---ATGACCTTAG---
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T C T G A C G A T T A C G T G C A G A T C G T A C A G C T C G A T T C G A A T C G A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:9
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-ATGACCTTAG
BNTGDCCTTG-
 A C G T C T G A C G A T T A C G T G C A G A T C G T A C A G C T C G A T T C G A A T C G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:ATGACCTTAG-
-TGACCTTGAV
 C T G A C G A T T A C G T G C A G A T C G T A C A G C T C G A T T C G A A T C G A C G T
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A