Information for 15-AGCCGGCCAG (Motif 26)

C G T A A C T G A G T C A G T C A C T G A C T G A G T C A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A C T G A G T C A G T C A C T G A C T G A G T C A C G T
p-value:1e-4
log p-value:-1.131e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif16.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets67.4 +/- 18.7bp
Average Position of motif in Background49.8 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AGCCGGCCAG
TGGCAGNCTGCCAG
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A G T C A C T G A C T G A G T C A G T C C G T A A C T G
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGCCGGCCAG
AGCGCGCC--
 C G T A A C T G A G T C A G T C A C T G A C T G A G T C A G T C C G T A A C T G
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AGCCGGCCAG
----TGCCAA
 C G T A A C T G A G T C A G T C A C T G A C T G A G T C A G T C C G T A A C T G
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGCCGGCCAG
CAGCC------
 A C G T C G T A A C T G A G T C A G T C A C T G A C T G A G T C A G T C C G T A A C T G
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AGCCGGCCAG----
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T C G T A A C T G A G T C A G T C A C T G A C T G A G T C A G T C C G T A A C T G A C G T A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGCCGGCCAG-
--CGTGCCAAG
 C G T A A C T G A G T C A G T C A C T G A C T G A G T C A G T C C G T A A C T G A C G T
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:forward strand
Alignment:AGCCGGCCAG---
--AAGGCAAGTGT
 C G T A A C T G A G T C A G T C A C T G A C T G A G T C A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.51
Offset:3
Orientation:forward strand
Alignment:AGCCGGCCAG-
---AGGCCTAG
 C G T A A C T G A G T C A G T C A C T G A C T G A G T C A G T C C G T A A C T G A C G T
A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:AGCCGGCCAG---
---ATGCCAGACN
 C G T A A C T G A G T C A G T C A C T G A C T G A G T C A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:AGCCGGCCAG---
---TGCCCAGNHW
 C G T A A C T G A G T C A G T C A C T G A C T G A G T C A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A