Information for 9-ACAGGCCTCG (Motif 20)

C T G A A G T C C G T A A C T G A C T G A G T C A G T C G A C T T A G C A C T G
Reverse Opposite:
G T A C A T C G C T G A A C T G C T A G A G T C A G T C A C G T T C A G A G C T
p-value:1e-9
log p-value:-2.075e+01
Information Content per bp:1.847
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.16%
Number of Background Sequences with motif156.8
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets57.2 +/- 27.5bp
Average Position of motif in Background48.7 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.83
Offset:2
Orientation:forward strand
Alignment:ACAGGCCTCG
--AGGCCTNG
 C T G A A G T C C G T A A C T G A C T G A G T C A G T C G A C T T A G C A C T G
A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.83
Offset:2
Orientation:forward strand
Alignment:ACAGGCCTCG
--AGGCCTAG
 C T G A A G T C C G T A A C T G A C T G A G T C A G T C G A C T T A G C A C T G
A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:ACAGGCCTCG-----
-CAGGCCNNGGCCNN
 C T G A A G T C C G T A A C T G A C T G A G T C A G T C G A C T T A G C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ACAGGCCTCG
CACAGN-----
 A C G T C T G A A G T C C G T A A C T G A C T G A G T C A G T C G A C T T A G C A C T G
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ACAGGCCTCG----
ACATGCCCGGGCAT
 C T G A A G T C C G T A A C T G A C T G A G T C A G T C G A C T T A G C A C T G A C G T A C G T A C G T A C G T
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ACAGGCCTCG
NNACTTGCCTT-
 A C G T A C G T C T G A A G T C C G T A A C T G A C T G A G T C A G T C G A C T T A G C A C T G
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----ACAGGCCTCG-
NNGGCCACGCCTTTN
 A C G T A C G T A C G T A C G T C T G A A G T C C G T A A C T G A C T G A G T C A G T C G A C T T A G C A C T G A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

PH0141.1_Pknox2/Jaspar

Match Rank:8
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------ACAGGCCTCG
NNATTGACAGGTGCTT
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G T A A C T G A C T G A G T C A G T C G A C T T A G C A C T G
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:ACAGGCCTCG--
--TGACCTTGAN
 C T G A A G T C C G T A A C T G A C T G A G T C A G T C G A C T T A G C A C T G A C G T A C G T
A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

MEIS2/MA0774.1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---ACAGGCCTCG
TTGACAGC-----
 A C G T A C G T A C G T C T G A A G T C C G T A A C T G A C T G A G T C A G T C G A C T T A G C A C T G
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T