Information for 10-TCAAGGCTGATGT (Motif 19)

A C G T A G T C G T C A C G T A A C T G A C T G A G T C A C G T A C T G C T G A A C G T A T C G A C G T
Reverse Opposite:
G T C A A T G C C G T A A G C T A G T C C G T A A C T G A G T C A G T C A C G T A C G T A C T G C G T A
p-value:1e-9
log p-value:-2.150e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.6 +/- 19.5bp
Average Position of motif in Background73.2 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TCAAGGCTGATGT
----NGCTN----
 A C G T A G T C G T C A C G T A A C T G A C T G A G T C A C G T A C T G C T G A A C G T A T C G A C G T
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:2
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TCAAGGCTGATGT
NTCAAGGTCA----
 A C G T A C G T A G T C G T C A C G T A A C T G A C T G A G T C A C G T A C T G C T G A A C G T A T C G A C G T
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TCAAGGCTGATGT
--TWGTCTGV---
 A C G T A G T C G T C A C G T A A C T G A C T G A G T C A C G T A C T G C T G A A C G T A T C G A C G T
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TCAAGGCTGATGT
--NNNANTGA---
 A C G T A G T C G T C A C G T A A C T G A C T G A G T C A C G T A C T G C T G A A C G T A T C G A C G T
A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TCAAGGCTGATGT-----
-AAGGCCAGATGGTCCGG
 A C G T A G T C G T C A C G T A A C T G A C T G A G T C A C G T A C T G C T G A A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:6
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TCAAGGCTGATGT
AGGTCAAGGTCA----
 A C G T A C G T A C G T A C G T A G T C G T C A C G T A A C T G A C T G A G T C A C G T A C T G C T G A A C G T A T C G A C G T
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T A C G T A C G T A C G T

ZBTB18/MA0698.1/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TCAAGGCTGATGT--
--CATCCAGATGTTC
 A C G T A G T C G T C A C G T A A C T G A C T G A G T C A C G T A C T G C T G A A C G T A T C G A C G T A C G T A C G T
A C G T A C G T G T A C C G T A A C G T T G A C G T A C C G T A A T C G G T C A A C G T C T A G G A C T C A G T A G T C

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TCAAGGCTGATGT
BTCAAGGTCA----
 A C G T A C G T A G T C G T C A C G T A A C T G A C T G A G T C A C G T A C T G C T G A A C G T A T C G A C G T
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:9
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----TCAAGGCTGATGT
AAGTTCAAGGTCAGC--
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A C G T A A C T G A C T G A G T C A C G T A C T G C T G A A C G T A T C G A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TCAAGGCTGATGT----
NNNNNATTGATGNGTGN
 A C G T A G T C G T C A C G T A A C T G A C T G A G T C A C G T A C T G C T G A A C G T A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A