Information for 9-TTACCTTTGCCAA (Motif 18)

A G C T A C G T T G C A A T G C G A T C G A C T A G C T C A G T A T C G T A G C G T A C G T C A T C G A
Reverse Opposite:
A G C T C A G T C A T G A T C G T A G C G T C A T C G A C T G A C T A G T A C G A C G T T G C A T C G A
p-value:1e-9
log p-value:-2.150e+01
Information Content per bp:1.469
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif9.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets53.9 +/- 23.7bp
Average Position of motif in Background51.4 +/- 20.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TTACCTTTGCCAA-
TGACCTTTGCCCTA
 A G C T A C G T T G C A A T G C G A T C G A C T A G C T C A G T A T C G T A G C G T A C G T C A T C G A A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TTACCTTTGCCAA-
TGACCTTTGCCCCA
 A G C T A C G T T G C A A T G C G A T C G A C T A G C T C A G T A T C G T A G C G T A C G T C A T C G A A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TTACCTTTGCCAA--
TGACCTTTGCCCTAN
 A G C T A C G T T G C A A T G C G A T C G A C T A G C T C A G T A T C G T A G C G T A C G T C A T C G A A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.68
Offset:5
Orientation:forward strand
Alignment:TTACCTTTGCCAA--
-----GGTGCCAAGT
 A G C T A C G T T G C A A T G C G A T C G A C T A G C T C A G T A T C G T A G C G T A C G T C A T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:5
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TTACCTTTGCCAA
TGACCTTTNCNT-
 A G C T A C G T T G C A A T G C G A T C G A C T A G C T C A G T A T C G T A G C G T A C G T C A T C G A
A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.68
Offset:6
Orientation:forward strand
Alignment:TTACCTTTGCCAA-
------TTGCCAAG
 A G C T A C G T T G C A A T G C G A T C G A C T A G C T C A G T A T C G T A G C G T A C G T C A T C G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTACCTTTGCCAA
CTGACCTTTG----
 A C G T A G C T A C G T T G C A A T G C G A T C G A C T A G C T C A G T A T C G T A G C G T A C G T C A T C G A
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.66
Offset:5
Orientation:forward strand
Alignment:TTACCTTTGCCAA-
-----CGTGCCAAG
 A G C T A C G T T G C A A T G C G A T C G A C T A G C T C A G T A T C G T A G C G T A C G T C A T C G A A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.66
Offset:7
Orientation:reverse strand
Alignment:TTACCTTTGCCAA
-------TGCCAA
 A G C T A C G T T G C A A T G C G A T C G A C T A G C T C A G T A T C G T A G C G T A C G T C A T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

Nr2f6/MA0677.1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTACCTTTGCCAA-
TGACCTTTGACCTN
 A G C T A C G T T G C A A T G C G A T C G A C T A G C T C A G T A T C G T A G C G T A C G T C A T C G A A C G T
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C