Motif 13

Information for 5-CCATCCCCGCCCC (Motif 13)

Reverse Opposite:

p-value:	1e-10
log p-value:	-2.422e+01
Information Content per bp:	1.939
Number of Target Sequences with motif	6.0
Percentage of Target Sequences with motif	0.72%
Number of Background Sequences with motif	4.0
Percentage of Background Sequences with motif	0.01%
Average Position of motif in Targets	60.7 +/- 22.2bp
Average Position of motif in Background	69.3 +/- 17.4bp
Strand Bias (log2 ratio + to - strand density)	10.0
Multiplicity (# of sites on avg that occur together)	1.00
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

SP1/MA0079.3/Jaspar

Match Rank:	1
Score:	0.78
Offset:	3
Orientation:	forward strand
Alignment:	CCATCCCCGCCCC- ---GCCCCGCCCCC

PB0107.1_Ascl2_2/Jaspar

Match Rank:	2
Score:	0.77
Offset:	0
Orientation:	forward strand
Alignment:	CCATCCCCGCCCC--- CTATCCCCGCCCTATT

PB0110.1_Bcl6b_2/Jaspar

Match Rank:	3
Score:	0.77
Offset:	2
Orientation:	forward strand
Alignment:	CCATCCCCGCCCC----- --ATCCCCGCCCCTAAAA

POL003.1_GC-box/Jaspar

Match Rank:	4
Score:	0.76
Offset:	1
Orientation:	reverse strand
Alignment:	CCATCCCCGCCCC-- -NAGCCCCGCCCCCN

Sp1(Zf)/Promoter/Homer

Match Rank:	5
Score:	0.75
Offset:	2
Orientation:	forward strand
Alignment:	CCATCCCCGCCCC- --GGCCCCGCCCCC

KLF5/MA0599.1/Jaspar

Match Rank:	6
Score:	0.75
Offset:	3
Orientation:	forward strand
Alignment:	CCATCCCCGCCCC ---GCCCCGCCCC

PB0039.1_Klf7_1/Jaspar

Match Rank:	7
Score:	0.74
Offset:	0
Orientation:	forward strand
Alignment:	CCATCCCCGCCCC--- TCGACCCCGCCCCTAT

SP2/MA0516.1/Jaspar

Match Rank:	8
Score:	0.74
Offset:	3
Orientation:	forward strand
Alignment:	CCATCCCCGCCCC----- ---GCCCCGCCCCCTCCC

PB0202.1_Zfp410_2/Jaspar

Match Rank:	9
Score:	0.74
Offset:	1
Orientation:	forward strand
Alignment:	CCATCCCCGCCCC----- -TCACCCCGCCCCAAATT

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:	10
Score:	0.71
Offset:	4
Orientation:	reverse strand
Alignment:	CCATCCCCGCCCC ----CCCCCCCC-