Information for 3-CTGACCTTGG (Motif 3)

G A T C C G A T A T C G T G C A T G A C A T G C A G C T C A G T C A T G A C T G
Reverse Opposite:
T G A C G T A C G T C A T C G A T A C G A C T G A C G T T A G C G C T A C T A G
p-value:1e-19
log p-value:-4.550e+01
Information Content per bp:1.694
Number of Target Sequences with motif203.0
Percentage of Target Sequences with motif24.08%
Number of Background Sequences with motif5828.6
Percentage of Background Sequences with motif12.46%
Average Position of motif in Targets50.3 +/- 26.3bp
Average Position of motif in Background50.9 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:CTGACCTTGG
CTGACCTTTG
 G A T C C G A T A T C G T G C A T G A C A T G C A G C T C A G T C A T G A C T G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:2
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:CTGACCTTGG-
-TGACCTTGAV
 G A T C C G A T A T C G T G C A T G A C A T G C A G C T C A G T C A T G A C T G A C G T
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-CTGACCTTGG
BNTGDCCTTG-
 A C G T G A T C C G A T A T C G T G C A T G A C A T G C A G C T C A G T C A T G A C T G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:4
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:CTGACCTTGG-
-TGACCTTGAN
 G A T C C G A T A T C G T G C A T G A C A T G C A G C T C A G T C A T G A C T G A C G T
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.87
Offset:0
Orientation:forward strand
Alignment:CTGACCTTGG
NTGACCTTGA
 G A T C C G A T A T C G T G C A T G A C A T G C A G C T C A G T C A T G A C T G
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

Nr5a2/MA0505.1/Jaspar

Match Rank:6
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-CTGACCTTGG----
GCTGACCTTGAACTN
 A C G T G A T C C G A T A T C G T G C A T G A C A T G C A G C T C A G T C A T G A C T G A C G T A C G T A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Esrrg/MA0643.1/Jaspar

Match Rank:7
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:CTGACCTTGG
ATGACCTTGA
 G A T C C G A T A T C G T G C A T G A C A T G C A G C T C A G T C A T G A C T G
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

PB0014.1_Esrra_1/Jaspar

Match Rank:8
Score:0.84
Offset:-4
Orientation:reverse strand
Alignment:----CTGACCTTGG---
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A C G T G A T C C G A T A T C G T G C A T G A C A T G C A G C T C A G T C A T G A C T G A C G T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

ESRRB/MA0141.3/Jaspar

Match Rank:9
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-CTGACCTTGG
NATGACCTTGA
 A C G T G A T C C G A T A T C G T G C A T G A C A T G C A G C T C A G T C A T G A C T G
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:CTGACCTTGG
-TGACCTYA-
 G A T C C G A T A T C G T G C A T G A C A T G C A G C T C A G T C A T G A C T G
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T