Information for 2-TGTTTRCWBW (Motif 2)

A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A C T G C G A T
Reverse Opposite:
C G T A T G A C C G T A T C A G A G C T G T C A C G T A C G T A A G T C C G T A
p-value:1e-28
log p-value:-6.587e+01
Information Content per bp:1.729
Number of Target Sequences with motif96.0
Percentage of Target Sequences with motif11.39%
Number of Background Sequences with motif1357.7
Percentage of Background Sequences with motif2.90%
Average Position of motif in Targets45.1 +/- 26.3bp
Average Position of motif in Background49.8 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:1
Score:0.96
Offset:0
Orientation:forward strand
Alignment:TGTTTRCWBW
TRTTTACTTW
 A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A C T G C G A T
A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:TGTTTRCWBW
TGTTTACTTT
 A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A C T G C G A T
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:3
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:TGTTTRCWBW
TGTTTACTTT
 A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A C T G C G A T
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXA1/MA0148.3/Jaspar

Match Rank:4
Score:0.94
Offset:-4
Orientation:forward strand
Alignment:----TGTTTRCWBW-
TCCATGTTTACTTTG
 A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A C T G C G A T A C G T
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:5
Score:0.93
Offset:-3
Orientation:forward strand
Alignment:---TGTTTRCWBW--
BSNTGTTTACWYWGN
 A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A C T G C G A T A C G T A C G T
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

Foxa2/MA0047.2/Jaspar

Match Rank:6
Score:0.92
Offset:0
Orientation:forward strand
Alignment:TGTTTRCWBW--
TGTTTACTTAGG
 A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A C T G C G A T A C G T A C G T
A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:7
Score:0.92
Offset:-2
Orientation:forward strand
Alignment:--TGTTTRCWBW
CNTGTTTACATA
 A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A C T G C G A T
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.91
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTRCWBW-----
NSTGTTTRCWCAGBNNN
 A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A C T G C G A T A C G T A C G T A C G T A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

FOXD2/MA0847.1/Jaspar

Match Rank:9
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:TGTTTRCWBW
TGTTTAC---
 A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A C T G C G A T
G A C T T C A G C G A T C A G T C A G T C T G A A G T C A C G T A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:10
Score:0.90
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTRCWBW
TTTGTTTACTTA
 A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A C T G C G A T
C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A