Information for 9-CACGTGGCAT (Motif 18)

A G T C C G T A G T A C A C T G A G C T A C T G A C T G A G T C C G T A C G A T
Reverse Opposite:
C G T A C G A T A C T G A G T C A G T C C T G A G T A C C A T G G A C T A C T G
p-value:1e-9
log p-value:-2.272e+01
Information Content per bp:1.834
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.14%
Number of Background Sequences with motif136.5
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets46.2 +/- 24.7bp
Average Position of motif in Background46.5 +/- 33.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Creb3l2/MA0608.1/Jaspar

Match Rank:1
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-CACGTGGCAT
ACACGTGGC--
 A C G T A G T C C G T A G T A C A C T G A G C T A C T G A C T G A G T C C G T A C G A T
G C T A A T G C C G T A A G T C A C T G A C G T A T C G C A T G G T A C A C G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:2
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:CACGTGGCAT
CACGTGGC--
 A G T C C G T A G T A C A C T G A G C T A C T G A C T G A G T C C G T A C G A T
A G T C C G T A A G T C A C T G A C G T A C T G A T C G G A T C A C G T A C G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:CACGTGGCAT
CACGTGGN--
 A G T C C G T A G T A C A C T G A G C T A C T G A C T G A G T C C G T A C G A T
G T A C C T G A A G T C C T A G G A C T A C T G A T C G A G C T A C G T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:4
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--CACGTGGCAT
GTCACGTGGM--
 A C G T A C G T A G T C C G T A G T A C A C T G A G C T A C T G A C T G A G T C C G T A C G A T
T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C A C G T A C G T

HEY2/MA0649.1/Jaspar

Match Rank:5
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CACGTGGCAT
GGCACGTGNC--
 A C G T A C G T A G T C C G T A G T A C A C T G A G C T A C T G A C T G A G T C C G T A C G A T
A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C A C G T A C G T

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---CACGTGGCAT
NNCCACGTGG---
 A C G T A C G T A C G T A G T C C G T A G T A C A C T G A G C T A C T G A C T G A G T C C G T A C G A T
T A C G T C G A T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A C G T A C G T A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CACGTGGCAT
CACGTGDC--
 A G T C C G T A G T A C A C T G A G C T A C T G A C T G A G T C C G T A C G A T
G A T C C T G A A G T C C T A G G C A T C T A G C G T A G A T C A C G T A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CACGTGGCAT
CACGTGNC--
 A G T C C G T A G T A C A C T G A G C T A C T G A C T G A G T C C G T A C G A T
G T A C C T G A A G T C C T A G G C A T A C T G G T C A G A T C A C G T A C G T

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---CACGTGGCAT
NNCCACGTGG---
 A C G T A C G T A C G T A G T C C G T A G T A C A C T G A G C T A C T G A C T G A G T C C G T A C G A T
T C A G T C A G T A G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A C G T A C G T A C G T

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----CACGTGGCAT
NNACCACGTGGT--
 A C G T A C G T A C G T A C G T A G T C C G T A G T A C A C T G A G C T A C T G A C T G A G T C C G T A C G A T
C G A T T C A G T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T A C G T A C G T