Information for 9-GGAGCCARTGTGT (Motif 14)

A C T G A T C G C G T A A T C G A G T C A G T C C T G A C T G A C G A T A T C G A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A T G C G C T A G A C T A G C T C T A G C T A G A T G C A C G T A T G C A G T C
p-value:1e-10
log p-value:-2.477e+01
Information Content per bp:1.829
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif22.5
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets54.0 +/- 26.0bp
Average Position of motif in Background46.4 +/- 34.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCCARTGTGT
CGGAGC--------
 A C G T A C T G A T C G C G T A A T C G A G T C A G T C C T G A C T G A C G A T A T C G A C G T A C T G A C G T
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGAGCCARTGTGT---
-NNNCCATTGTGTNAN
 A C T G A T C G C G T A A T C G A G T C A G T C C T G A C T G A C G A T A T C G A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

PB0112.1_E2F2_2/Jaspar

Match Rank:3
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GGAGCCARTGTGT
CCTTCGGCGCCAAAAGG-
 A C G T A C G T A C G T A C G T A C G T A C T G A T C G C G T A A T C G A G T C A G T C C T G A C T G A C G A T A T C G A C G T A C T G A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GGAGCCARTGTGT
--AGCCAATCGG-
 A C T G A T C G C G T A A T C G A G T C A G T C C T G A C T G A C G A T A T C G A C G T A C T G A C G T
A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GGAGCCARTGTGT
AGCTCGGCGCCAAAAGC-
 A C G T A C G T A C G T A C G T A C G T A C T G A T C G C G T A A T C G A G T C A G T C C T G A C T G A C G A T A T C G A C G T A C T G A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GGAGCCARTGTGT
-CAGCC-------
 A C T G A T C G C G T A A T C G A G T C A G T C C T G A C T G A C G A T A T C G A C G T A C T G A C G T
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F1/MA0024.3/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GGAGCCARTGTGT
TTTGGCGCCAAA----
 A C G T A C G T A C G T A C T G A T C G C G T A A T C G A G T C A G T C C T G A C T G A C G A T A T C G A C G T A C T G A C G T
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGAGCCARTGTGT
GCNGCCATCTTG-
 A C T G A T C G C G T A A T C G A G T C A G T C C T G A C T G A C G A T A T C G A C G T A C T G A C G T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------GGAGCCARTGTGT
GRTGMTRGAGCC-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G C G T A A T C G A G T C A G T C C T G A C T G A C G A T A T C G A C G T A C T G A C G T
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GGAGCCARTGTGT
AGGVNCCTTTGT--
 A C G T A C T G A T C G C G T A A T C G A G T C A G T C C T G A C T G A C G A T A T C G A C G T A C T G A C G T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T