Information for 10-CAAATATTTGCYY (Motif 9)

A G T C G T C A C G T A C T G A A G C T C T G A A C G T A C G T A C G T C T A G G A T C G A T C A G C T
Reverse Opposite:
T C G A C T A G C A T G A G T C G T C A C G T A C G T A A G C T C T G A A G C T A C G T A C G T A C T G
p-value:1e-14
log p-value:-3.417e+01
Information Content per bp:1.819
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.4 +/- 26.4bp
Average Position of motif in Background30.8 +/- 21.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----CAAATATTTGCYY
NNTNNCAATATTAG---
 A C G T A C G T A C G T A C G T A G T C G T C A C G T A C T G A A G C T C T G A A C G T A C G T A C G T C T A G G A T C G A T C A G C T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----CAAATATTTGCYY
NNTNNCAATATTAG---
 A C G T A C G T A C G T A C G T A G T C G T C A C G T A C T G A A G C T C T G A A C G T A C G T A C G T C T A G G A T C G A T C A G C T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:3
Score:0.68
Offset:4
Orientation:forward strand
Alignment:CAAATATTTGCYY-
----TRTTTACTTW
 A G T C G T C A C G T A C T G A A G C T C T G A A C G T A C G T A C G T C T A G G A T C G A T C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A

MF0010.1_Homeobox_class/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CAAATATTTGCYY
-AATTATT-----
 A G T C G T C A C G T A C T G A A G C T C T G A A C G T A C G T A C G T C T A G G A T C G A T C A G C T
A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:5
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CAAATATTTGCYY-
---ATATTTACATA
 A G T C G T C A C G T A C T G A A G C T C T G A A C G T A C G T A C G T C T A G G A T C G A T C A G C T A C G T
A C G T A C G T A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A

FOXB1/MA0845.1/Jaspar

Match Rank:6
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CAAATATTTGCYY-
---ATATTTACATA
 A G T C G T C A C G T A C T G A A G C T C T G A A C G T A C G T A C G T C T A G G A T C G A T C A G C T A C G T
A C G T A C G T A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

Foxd3/MA0041.1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CAAATATTTGCYY
-GAATGTTTGTTT
 A G T C G T C A C G T A C T G A A G C T C T G A A C G T A C G T A C G T C T A G G A T C G A T C A G C T
A C G T C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:8
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CAAATATTTGCYY-
----TGTTTACTTT
 A G T C G T C A C G T A C T G A A G C T C T G A A C G T A C G T A C G T C T A G G A T C G A T C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CAAATATTTGCYY--
-----ATTTGCATAT
 A G T C G T C A C G T A C T G A A G C T C T G A A C G T A C G T A C G T C T A G G A T C G A T C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

FOXC2/MA0846.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CAAATATTTGCYY-
--TTTGTTTACTTA
 A G T C G T C A C G T A C T G A A G C T C T G A A C G T A C G T A C G T C T A G G A T C G A T C A G C T A C G T
A C G T A C G T C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A