Information for 5-AGCTCTGGGTCAG (Motif 5)

C G T A A C T G A T G C C G A T A T G C G A C T A C T G C T A G C T A G A C G T A G T C C T G A T A C G
Reverse Opposite:
A T G C A G C T C T A G T G C A A G T C A G T C A G T C C T G A A T C G C G T A T A C G G T A C C G A T
p-value:1e-20
log p-value:-4.799e+01
Information Content per bp:1.730
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif3.77%
Number of Background Sequences with motif167.0
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets50.5 +/- 25.9bp
Average Position of motif in Background49.6 +/- 36.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0153.1_Nr2f2_2/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:forward strand
Alignment:AGCTCTGGGTCAG---
CGCGCCGGGTCACGTA
 C G T A A C T G A T G C C G A T A T G C G A C T A C T G C T A G C T A G A C G T A G T C C T G A T A C G A C G T A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

PB0157.1_Rara_2/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AGCTCTGGGTCAG---
AGAGCGGGGTCAAGTA
 C G T A A C T G A T G C C G A T A T G C G A C T A C T G C T A G C T A G A C G T A G T C C T G A T A C G A C G T A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

FOS::JUN/MA0099.2/Jaspar

Match Rank:3
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:AGCTCTGGGTCAG
-----TGAGTCA-
 C G T A A C T G A T G C C G A T A T G C G A C T A C T G C T A G C T A G A C G T A G T C C T G A T A C G
A C G T A C G T A C G T A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.66
Offset:6
Orientation:forward strand
Alignment:AGCTCTGGGTCAG
------AGGTCA-
 C G T A A C T G A T G C C G A T A T G C G A C T A C T G C T A G C T A G A C G T A G T C C T G A T A C G
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGCTCTGGGTCAG----
NTNNNGGGGTCANGNNN
 C G T A A C T G A T G C C G A T A T G C G A C T A C T G C T A G C T A G A C G T A G T C C T G A T A C G A C G T A C G T A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

FOSL2/MA0478.1/Jaspar

Match Rank:6
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:AGCTCTGGGTCAG--
----NTGAGTCATCN
 C G T A A C T G A T G C C G A T A T G C G A C T A C T G C T A G C T A G A C G T A G T C C T G A T A C G A C G T A C G T
A C G T A C G T A C G T A C G T T G C A A C G T A C T G C G T A T A C G A G C T A G T C C G T A G A C T A G T C T G A C

JUNB/MA0490.1/Jaspar

Match Rank:7
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:AGCTCTGGGTCAG--
----ATGAGTCATCN
 C G T A A C T G A T G C C G A T A T G C G A C T A C T G C T A G C T A G A C G T A G T C C T G A T A C G A C G T A C G T
A C G T A C G T A C G T A C G T T G C A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G C T G A T C G T A C

RORA/MA0071.1/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AGCTCTGGGTCAG
--ATCAAGGTCA-
 C G T A A C T G A T G C C G A T A T G C G A C T A C T G C T A G C T A G A C G T A G T C C T G A T A C G
A C G T A C G T C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AGCTCTGGGTCAG
---GATGAGTCAT
 C G T A A C T G A T G C C G A T A T G C G A C T A C T G C T A G C T A G A C G T A G T C C T G A T A C G
A C G T A C G T A C G T T A C G T G C A C G A T C A T G C G T A A T C G C G A T G T A C C G T A A G C T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGCTCTGGGTCAG
AGGTCAAGGTCA-
 C G T A A C T G A T G C C G A T A T G C G A C T A C T G C T A G C T A G A C G T A G T C C T G A T A C G
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T