Information for 3-ATGTCAACAT (Motif 3)

T C G A C A G T A T C G G C A T G T A C G T C A C G T A A G T C G T C A G C A T
Reverse Opposite:
C G T A C A G T T C A G G C A T C A G T C A T G C G T A T A G C G T C A A G C T
p-value:1e-29
log p-value:-6.882e+01
Information Content per bp:1.599
Number of Target Sequences with motif140.0
Percentage of Target Sequences with motif17.01%
Number of Background Sequences with motif2648.8
Percentage of Background Sequences with motif5.70%
Average Position of motif in Targets44.8 +/- 26.2bp
Average Position of motif in Background50.9 +/- 35.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXB1/MA0845.1/Jaspar

Match Rank:1
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-ATGTCAACAT
TATGTAAATAT
 A C G T T C G A C A G T A T C G G C A T G T A C G T C A C G T A A G T C G T C A G C A T
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-ATGTCAACAT
CCTGTCAA---
 A C G T T C G A C A G T A T C G G C A T G T A C G T C A C G T A A G T C G T C A G C A T
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:ATGTCAACAT
NTGTCAN---
 T C G A C A G T A T C G G C A T G T A C G T C A C G T A A G T C G T C A G C A T
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:4
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-ATGTCAACAT
TATGTAAATAT
 A C G T T C G A C A G T A T C G G C A T G T A C G T C A C G T A A G T C G T C A G C A T
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:5
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---ATGTCAACAT--
NCWRWGTAAACANSV
 A C G T A C G T A C G T T C G A C A G T A T C G G C A T G T A C G T C A C G T A A G T C G T C A G C A T A C G T A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:6
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-ATGTCAACAT-
TATGTAAACANG
 A C G T T C G A C A G T A T C G G C A T G T A C G T C A C G T A A G T C G T C A G C A T A C G T
G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-ATGTCAACAT
RHTGWCAR---
 A C G T T C G A C A G T A T C G G C A T G T A C G T C A C G T A A G T C G T C A G C A T
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:8
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:ATGTCAACAT--
ATGTAAACADGS
 T C G A C A G T A T C G G C A T G T A C G T C A C G T A A G T C G T C A G C A T A C G T A C G T
C G T A C A G T T C A G C G A T G T C A G T C A C G T A A G T C C G T A C G A T A T C G A T G C

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-ATGTCAACAT
GCTGTCAA---
 A C G T T C G A C A G T A T C G G C A T G T A C G T C A C G T A A G T C G T C A G C A T
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:10
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---ATGTCAACAT
NCTAAGTAAACA-
 A C G T A C G T A C G T T C G A C A G T A T C G G C A T G T A C G T C A C G T A A G T C G T C A G C A T
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T