Information for 12-GCCAGGAGCC (Motif 26)

C T A G A G T C G T A C G C T A C T A G A T C G C G T A C T A G T A G C T G A C
Reverse Opposite:
A C T G A T C G G A T C G C A T T A G C G A T C C G A T C A T G T C A G G A T C
p-value:1e-5
log p-value:-1.329e+01
Information Content per bp:1.660
Number of Target Sequences with motif61.0
Percentage of Target Sequences with motif7.41%
Number of Background Sequences with motif1800.3
Percentage of Background Sequences with motif3.87%
Average Position of motif in Targets49.2 +/- 24.8bp
Average Position of motif in Background50.5 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GCCAGGAGCC
---CGGAGC-
 C T A G A G T C G T A C G C T A C T A G A T C G C G T A C T A G T A G C T G A C
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GCCAGGAGCC
CGTGCCAAG----
 A C G T A C G T A C G T C T A G A G T C G T A C G C T A C T A G A T C G C G T A C T A G T A G C T G A C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGGAGCC
TGCCAA-----
 A C G T C T A G A G T C G T A C G C T A C T A G A T C G C G T A C T A G T A G C T G A C
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCCAGGAGCC-
TGTCAGGGGGCG
 A C G T C T A G A G T C G T A C G C T A C T A G A T C G C G T A C T A G T A G C T G A C A C G T
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GCCAGGAGCC-
ATTTCCCAGVAKSCY
 A C G T A C G T A C G T A C G T C T A G A G T C G T A C G C T A C T A G A T C G C G T A C T A G T A G C T G A C A C G T
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

PB0147.1_Max_2/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCCAGGAGCC--
GTGCCACGCGACTG
 A C G T A C G T C T A G A G T C G T A C G C T A C T A G A T C G C G T A C T A G T A G C T G A C A C G T A C G T
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G

ID4/MA0824.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCCAGGAGCC
GACAGGTGTN
 C T A G A G T C G T A C G C T A C T A G A T C G C G T A C T A G T A G C T G A C
C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCCAGGAGCC
CTGCCCGCA---
 A C G T A C G T C T A G A G T C G T A C G C T A C T A G A T C G C G T A C T A G T A G C T G A C
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T

HES5/MA0821.1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCCAGGAGCC-
CGGCACGTGCCA
 A C G T C T A G A G T C G T A C G C T A C T A G A T C G C G T A C T A G T A G C T G A C A C G T
G A T C T C A G T C A G A G T C C T G A G A T C C T A G A G C T A C T G A G T C A G T C C T G A

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCCAGGAGCC
ANCAGGATGT
 C T A G A G T C G T A C G C T A C T A G A T C G C G T A C T A G T A G C T G A C
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T