Information for 22-GCTTTATGAGGAT (Motif 24)

A T C G G T A C C G A T A G C T C A G T T G C A C A G T T A C G C G T A C T A G A C T G T G C A C A G T
Reverse Opposite:
G C T A A C G T T G A C G A T C G C A T A T G C G T C A A C G T G C T A C T G A C G T A C A T G A T G C
p-value:1e-7
log p-value:-1.633e+01
Information Content per bp:1.668
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.82%
Number of Background Sequences with motif144.1
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets48.9 +/- 27.4bp
Average Position of motif in Background48.2 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GCTTTATGAGGAT
-TTTTATKRGG--
 A T C G G T A C C G A T A G C T C A G T T G C A C A G T T A C G C G T A C T A G A C T G T G C A C A G T
A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCTTTATGAGGAT
DGWTTTATGRCN--
 A C G T A T C G G T A C C G A T A G C T C A G T T G C A C A G T T A C G C G T A C T A G A C T G T G C A C A G T
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C A C G T A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCTTTATGAGGAT-
NAATTTTACGAGNTNN
 A C G T A C G T A T C G G T A C C G A T A G C T C A G T T G C A C A G T T A C G C G T A C T A G A C T G T G C A C A G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

HOXC13/MA0907.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCTTTATGAGGAT
NTTTTACGAGN--
 A T C G G T A C C G A T A G C T C A G T T G C A C A G T T A C G C G T A C T A G A C T G T G C A C A G T
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GCTTTATGAGGAT-
ANATTTTACGAGNNNN
 A C G T A C G T A T C G G T A C C G A T A G C T C A G T T G C A C A G T T A C G C G T A C T A G A C T G T G C A C A G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCTTTATGAGGAT
-TTTTATTRGN--
 A T C G G T A C C G A T A G C T C A G T T G C A C A G T T A C G C G T A C T A G A C T G T G C A C A G T
A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCTTTATGAGGAT
GNCTATAAAAGG--
 A C G T A T C G G T A C C G A T A G C T C A G T T G C A C A G T T A C G C G T A C T A G A C T G T G C A C A G T
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCTTTATGAGGAT
NTTTTATTGG---
 A T C G G T A C C G A T A G C T C A G T T G C A C A G T T A C G C G T A C T A G A C T G T G C A C A G T
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCTTTATGAGGAT
TTTTTATTGG---
 A T C G G T A C C G A T A G C T C A G T T G C A C A G T T A C G C G T A C T A G A C T G T G C A C A G T
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCTTTATGAGGAT
NTTTTATTGG---
 A T C G G T A C C G A T A G C T C A G T T G C A C A G T T A C G C G T A C T A G A C T G T G C A C A G T
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T A C G T