Information for 19-AGGATGTCTGCGT (Motif 21)

C G T A A C T G C T A G C G T A A C G T A C T G A C G T A G T C C G A T A T C G A G T C A T C G A C G T
Reverse Opposite:
C G T A A T G C A C T G A T G C C G T A A C T G C G T A A G T C C G T A A C G T A G T C A G T C A C G T
p-value:1e-10
log p-value:-2.498e+01
Information Content per bp:1.932
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.2 +/- 20.4bp
Average Position of motif in Background93.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGGATGTCTGCGT
-VBSYGTCTGG--
 C G T A A C T G C T A G C G T A A C G T A C T G A C G T A G T C C G A T A T C G A G T C A T C G A C G T
A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----AGGATGTCTGCGT
CTACTAGGATGTNNTN--
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C T A G C G T A A C G T A C T G A C G T A G T C C G A T A T C G A G T C A T C G A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGGATGTCTGCGT
---CTGTCTGG--
 C G T A A C T G C T A G C G T A A C G T A C T G A C G T A G T C C G A T A T C G A G T C A T C G A C G T
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGGATGTCTGCGT---
NNTNNTGTCTGGNNTNG
 A C G T C G T A A C T G C T A G C G T A A C G T A C T G A C G T A G T C C G A T A T C G A G T C A T C G A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

YY1(Zf)/Promoter/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGGATGTCTGCGT
CAAGATGGCGGC--
 A C G T C G T A A C T G C T A G C G T A A C G T A C T G A C G T A G T C C G A T A T C G A G T C A T C G A C G T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGGATGTCTGCGT
CAAGATGGCGGC--
 A C G T C G T A A C T G C T A G C G T A A C G T A C T G A C G T A G T C C G A T A T C G A G T C A T C G A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGGATGTCTGCGT
AAGGATATNTN---
 A C G T C G T A A C T G C T A G C G T A A C G T A C T G A C G T A G T C C G A T A T C G A G T C A T C G A C G T
T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AGGATGTCTGCGT
---TWGTCTGV--
 C G T A A C T G C T A G C G T A A C G T A C T G A C G T A G T C C G A T A T C G A G T C A T C G A C G T
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AGGATGTCTGCGT
ANCAGGATGT------
 A C G T A C G T A C G T C G T A A C T G C T A G C G T A A C G T A C T G A C G T A G T C C G A T A T C G A G T C A T C G A C G T
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AGGATGTCTGCGT
ANCAGGAAGT------
 A C G T A C G T A C G T C G T A A C T G C T A G C G T A A C G T A C T G A C G T A G T C C G A T A T C G A G T C A T C G A C G T
C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T