Information for 9-TGTCCTGCTG (Motif 20)

A C G T A T C G C A G T A T G C T A G C G A C T A T C G A T G C C G A T T C A G
Reverse Opposite:
A G T C C G T A T A C G A T G C C T G A A T C G A T C G G T C A T A G C T G C A
p-value:1e-10
log p-value:-2.509e+01
Information Content per bp:1.819
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif4.74%
Number of Background Sequences with motif604.2
Percentage of Background Sequences with motif1.30%
Average Position of motif in Targets48.4 +/- 26.1bp
Average Position of motif in Background50.3 +/- 38.7bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:TGTCCTGCTG-----
TNTCCTGCTGTGNNG
 A C G T A T C G C A G T A T G C T A G C G A C T A T C G A T G C C G A T T C A G A C G T A C G T A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:TGTCCTGCTG-----
NNTCCTGCTGTGNNN
 A C G T A T C G C A G T A T G C T A G C G A C T A T C G A T G C C G A T T C A G A C G T A C G T A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:TGTCCTGCTG-----
TCNCCTGCTGNGNNN
 A C G T A T C G C A G T A T G C T A G C G A C T A T C G A T G C C G A T T C A G A C G T A C G T A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.77
Offset:3
Orientation:forward strand
Alignment:TGTCCTGCTG---
---CCTGCTGAGH
 A C G T A T C G C A G T A T G C T A G C G A C T A T C G A T G C C G A T T C A G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TGTCCTGCTG--
CCCCCTGCTGTG
 A C G T A T C G C A G T A T G C T A G C G A C T A T C G A T G C C G A T T C A G A C G T A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--TGTCCTGCTG---
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T A T C G C A G T A T G C T A G C G A C T A T C G A T G C C G A T T C A G A C G T A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:7
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TGTCCTGCTG---
---CCAGCTGTTN
 A C G T A T C G C A G T A T G C T A G C G A C T A T C G A T G C C G A T T C A G A C G T A C G T A C G T
A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGTCCTGCTG
ACATCCTGNT-
 A C G T A C G T A T C G C A G T A T G C T A G C G A C T A T C G A T G C C G A T T C A G
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.61
Offset:5
Orientation:forward strand
Alignment:TGTCCTGCTG-----
-----TGCTGACTCA
 A C G T A T C G C A G T A T G C T A G C G A C T A T C G A T G C C G A T T C A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:10
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TGTCCTGCTG---
---HCAGCTGDTN
 A C G T A T C G C A G T A T G C T A G C G A C T A T C G A T G C C G A T T C A G A C G T A C G T A C G T
A C G T A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T