Information for 6-AGCAMWRGGMWGRGWG (Motif 18)

G T C A A C T G A G T C C G T A T G A C C G T A C T A G A C T G A T C G G T A C C G A T A T C G C T A G A C T G C G A T C T A G
Reverse Opposite:
A G T C C G T A T A G C A G T C A T G C G C T A A C T G T A G C A G T C A G T C G C A T A C T G A C G T A C T G A G T C A C G T
p-value:1e-11
log p-value:-2.667e+01
Information Content per bp:1.792
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.2 +/- 21.5bp
Average Position of motif in Background73.7 +/- 17.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myc/MA0147.2/Jaspar

Match Rank:1
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-AGCAMWRGGMWGRGWG
AAGCACATGG-------
 A C G T G T C A A C T G A G T C C G T A T G A C C G T A C T A G A C T G A T C G G T A C C G A T A T C G C T A G A C T G C G A T C T A G
T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.51
Offset:-6
Orientation:reverse strand
Alignment:------AGCAMWRGGMWGRGWG
NNNNTGAGCACTGTNNG-----
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C T G A G T C C G T A T G A C C G T A C T A G A C T G A T C G G T A C C G A T A T C G C T A G A C T G C G A T C T A G
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G A C G T A C G T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AGCAMWRGGMWGRGWG
GAACAATGGN-------
 A C G T G T C A A C T G A G T C C G T A T G A C C G T A C T A G A C T G A T C G G T A C C G A T A T C G C T A G A C T G C G A T C T A G
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-AGCAMWRGGMWGRGWG
CAGCC------------
 A C G T G T C A A C T G A G T C C G T A T G A C C G T A C T A G A C T G A T C G G T A C C G A T A T C G C T A G A C T G C G A T C T A G
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0107.1_Ascl2_2/Jaspar

Match Rank:5
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:AGCAMWRGGMWGRGWG--
--NATNGGGNGGGGANAN
 G T C A A C T G A G T C C G T A T G A C C G T A C T A G A C T G A T C G G T A C C G A T A T C G C T A G A C T G C G A T C T A G A C G T A C G T
A C G T A C G T C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G

POL003.1_GC-box/Jaspar

Match Rank:6
Score:0.49
Offset:3
Orientation:forward strand
Alignment:AGCAMWRGGMWGRGWG-
---AGGGGGCGGGGCTG
 G T C A A C T G A G T C C G T A T G A C C G T A C T A G A C T G A T C G G T A C C G A T A T C G C T A G A C T G C G A T C T A G A C G T
A C G T A C G T A C G T C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

Sox2/MA0143.3/Jaspar

Match Rank:7
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:AGCAMWRGGMWGRGWG
AACAAAGG--------
 G T C A A C T G A G T C C G T A T G A C C G T A C T A G A C T G A T C G G T A C C G A T A T C G C T A G A C T G C G A T C T A G
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:8
Score:0.47
Offset:-1
Orientation:reverse strand
Alignment:-AGCAMWRGGMWGRGWG
GAACAATGG--------
 A C G T G T C A A C T G A G T C C G T A T G A C C G T A C T A G A C T G A T C G G T A C C G A T A T C G C T A G A C T G C G A T C T A G
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.47
Offset:6
Orientation:forward strand
Alignment:AGCAMWRGGMWGRGWG
------GGGGGGGG--
 G T C A A C T G A G T C C G T A T G A C C G T A C T A G A C T G A T C G G T A C C G A T A T C G C T A G A C T G C G A T C T A G
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:10
Score:0.47
Offset:3
Orientation:forward strand
Alignment:AGCAMWRGGMWGRGWG
---RGKGGGCGGAGC-
 G T C A A C T G A G T C C G T A T G A C C G T A C T A G A C T G A T C G G T A C C G A T A T C G C T A G A C T G C G A T C T A G
A C G T A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T