Information for 3-ATGCMACAGAATGTCA (Motif 10)

C G T A C G A T C A T G A T G C G T A C G C T A G T A C C G T A A C T G C T G A G T C A A C G T A C T G A C G T G A T C C T G A
Reverse Opposite:
G A C T C T A G G T C A A G T C C G T A A C G T A G C T T G A C A C G T A C T G C G A T A C T G T A C G G T A C C G T A C G A T
p-value:1e-14
log p-value:-3.345e+01
Information Content per bp:1.711
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif19.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets42.9 +/- 25.2bp
Average Position of motif in Background41.1 +/- 20.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.60
Offset:10
Orientation:reverse strand
Alignment:ATGCMACAGAATGTCA-
----------NTGTCAN
 C G T A C G A T C A T G A T G C G T A C G C T A G T A C C G T A A C T G C T G A G T C A A C G T A C T G A C G T G A T C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:ATGCMACAGAATGTCA--
---GRACAGWMTGTYCTB
 C G T A C G A T C A T G A T G C G T A C G C T A G T A C C G T A A C T G C T G A G T C A A C G T A C T G A C G T G A T C C T G A A C G T A C G T
A C G T A C G T A C G T C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:ATGCMACAGAATGTCA--
---GAACADWATGTTCTT
 C G T A C G A T C A T G A T G C G T A C G C T A G T A C C G T A A C T G C T G A G T C A A C G T A C T G A C G T G A T C C T G A A C G T A C G T
A C G T A C G T A C G T C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T

NR3C2/MA0727.1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ATGCMACAGAATGTCA--
-GGGAACACAATGTTCCC
 C G T A C G A T C A T G A T G C G T A C G C T A G T A C C G T A A C T G C T G A G T C A A C G T A C T G A C G T G A T C C T G A A C G T A C G T
A C G T C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:ATGCMACAGAATGTCA--
--AGNACAGNCTGTTCTN
 C G T A C G A T C A T G A T G C G T A C G C T A G T A C C G T A A C T G C T G A G T C A A C G T A C T G A C G T G A T C C T G A A C G T A C G T
A C G T A C G T C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ATGCMACAGAATGTCA--
--AGNACANNNTGTNCTN
 C G T A C G A T C A T G A T G C G T A C G C T A G T A C C G T A A C T G C T G A G T C A A C G T A C T G A C G T G A T C C T G A A C G T A C G T
A C G T A C G T C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C

MEIS3/MA0775.1/Jaspar

Match Rank:7
Score:0.57
Offset:9
Orientation:reverse strand
Alignment:ATGCMACAGAATGTCA-
---------CCTGTCAA
 C G T A C G A T C A T G A T G C G T A C G C T A G T A C C G T A A C T G C T G A G T C A A C G T A C T G A C G T G A T C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

TEAD4/MA0809.1/Jaspar

Match Rank:8
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:ATGCMACAGAATGTCA
-----NTGGAATGTN-
 C G T A C G A T C A T G A T G C G T A C G C T A G T A C C G T A A C T G C T G A G T C A A C G T A C T G A C G T G A T C C T G A
A C G T A C G T A C G T A C G T A C G T C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.57
Offset:4
Orientation:forward strand
Alignment:ATGCMACAGAATGTCA
----AACAGGAAGT--
 C G T A C G A T C A T G A T G C G T A C G C T A G T A C C G T A A C T G C T G A G T C A A C G T A C T G A C G T G A T C C T G A
A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:ATGCMACAGAATGTCA--
---GVACAGNMTGTYCTB
 C G T A C G A T C A T G A T G C G T A C G C T A G T A C C G T A A C T G C T G A G T C A A C G T A C T G A C G T G A T C C T G A A C G T A C G T
A C G T A C G T A C G T C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G