Information for 6-AACACAGAGC (Motif 9)

C G T A T G C A A T G C C G T A A G T C C G T A A C T G C G T A A C T G A T G C
Reverse Opposite:
A T C G A G T C A C G T A G T C A C G T A C T G C G A T A T C G A C G T A C G T
p-value:1e-18
log p-value:-4.190e+01
Information Content per bp:1.854
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.54%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets63.9 +/- 16.2bp
Average Position of motif in Background39.1 +/- 16.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AACACAGAGC
--CACAGN--
 C G T A T G C A A T G C C G T A A G T C C G T A A C T G C G T A A C T G A T G C
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AACACAGAGC
AAACCACAGAN-
 A C G T A C G T C G T A T G C A A T G C C G T A A G T C C G T A A C T G C G T A A C T G A T G C
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AACACAGAGC
---ACAAAG-
 C G T A T G C A A T G C C G T A A G T C C G T A A C T G C G T A A C T G A T G C
A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AACACAGAGC
AAACCACAGC--
 A C G T A C G T C G T A T G C A A T G C C G T A A G T C C G T A A C T G C G T A A C T G A T G C
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AACACAGAGC
AAAACAAAGG
 C G T A T G C A A T G C C G T A A G T C C G T A A C T G C G T A A C T G A T G C
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AACACAGAGC-----
---ACAAAGGNBCCT
 C G T A T G C A A T G C C G T A A G T C C G T A A C T G C G T A A C T G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:AACACAGAGC
----CGGAGC
 C G T A T G C A A T G C C G T A A G T C C G T A A C T G C G T A A C T G A T G C
A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

PB0166.1_Sox12_2/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AACACAGAGC---
AAACAGACAAAGGAAT
 A C G T A C G T A C G T C G T A T G C A A T G C C G T A A G T C C G T A A C T G C G T A A C T G A T G C A C G T A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AACACAGAGC
NWAACCACADNN-
 A C G T A C G T A C G T C G T A T G C A A T G C C G T A A G T C C G T A A C T G C G T A A C T G A T G C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AACACAGAGC
VRRACAAWGG
 C G T A T G C A A T G C C G T A A G T C C G T A A C T G C G T A A C T G A T G C
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G