Information for 3-CCTCTSCTTT (Motif 3)

A G T C A G T C C G A T G A T C G C A T A T G C A T G C A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A G T C A A T C G T A C G C G T A C T A G C G T A A C T G A C T G
p-value:1e-22
log p-value:-5.073e+01
Information Content per bp:1.808
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.16%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets45.6 +/- 27.0bp
Average Position of motif in Background50.4 +/- 11.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCTCTSCTTT--
ACTTTCGTTTCT
 A G T C A G T C C G A T G A T C G C A T A T G C A T G C A C G T A C G T A C G T A C G T A C G T
T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T

SPIC/MA0687.1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCTCTSCTTT--
TACTTCCTCTTTTN
 A C G T A C G T A G T C A G T C C G A T G A T C G C A T A T G C A T G C A C G T A C G T A C G T A C G T A C G T
C A G T C G T A A G T C A C G T C G A T G T A C T A G C A C G T A T G C C G A T C A G T C A G T G A C T C A G T

SPI1/MA0080.4/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCTCTSCTTT--
TACTTCCGCTTTTT
 A C G T A C G T A G T C A G T C C G A T G A T C G C A T A T G C A T G C A C G T A C G T A C G T A C G T A C G T
G C A T C T G A T A G C C G A T C A G T A T G C G A T C A C T G A T G C G C A T C G A T G C A T G A C T A G C T

PB0166.1_Sox12_2/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CCTCTSCTTT--------
--ANTCCTTTGTCTNNNN
 A G T C A G T C C G A T G A T C G C A T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCTCTSCTTT
CCTTTGTTTT
 A G T C A G T C C G A T G A T C G C A T A T G C A T G C A C G T A C G T A C G T
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCTCTSCTTT----
--TGACCTTTNCNT
 A G T C A G T C C G A T G A T C G C A T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

Tcf7/MA0769.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCTCTSCTTT--
CCTTTGATCTTT
 A G T C A G T C C G A T G A T C G C A T A T G C A T G C A C G T A C G T A C G T A C G T A C G T
A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T

Gfi1b/MA0483.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCTCTSCTTT
TGCTGTGATTT
 A C G T A G T C A G T C C G A T G A T C G C A T A T G C A T G C A C G T A C G T A C G T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CCTCTSCTTT
TNCCTTTGATGT
 A C G T A C G T A G T C A G T C C G A T G A T C G C A T A T G C A T G C A C G T A C G T A C G T
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T

LEF1/MA0768.1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CCTCTSCTTT--
AACCCTTTGATCTTT
 A C G T A C G T A C G T A G T C A G T C C G A T G A T C G C A T A T G C A T G C A C G T A C G T A C G T A C G T A C G T
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T