Information for 11-CTCACAGCGT (Motif 22)

A G T C A C G T T G A C G T C A T A G C T C G A A T C G G T A C A T C G A G C T
Reverse Opposite:
T C G A T A G C A C T G A T G C A C G T A T C G C A G T A C T G T C G A A C T G
p-value:1e-13
log p-value:-3.142e+01
Information Content per bp:1.700
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.75%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets52.8 +/- 18.7bp
Average Position of motif in Background62.9 +/- 18.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CTCACAGCGT---
TCNCTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A G T C A C G T T G A C G T C A T A G C T C G A A T C G G T A C A T C G A G C T A C G T A C G T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CTCACAGCGT
----CAGCC-
 A G T C A C G T T G A C G T C A T A G C T C G A A T C G G T A C A T C G A G C T
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CTCACAGCGT---
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A G T C A C G T T G A C G T C A T A G C T C G A A T C G G T A C A T C G A G C T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CTCACAGCGT---
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A G T C A C G T T G A C G T C A T A G C T C G A A T C G G T A C A T C G A G C T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTCACAGCGT
--CACAGN--
 A G T C A C G T T G A C G T C A T A G C T C G A A T C G G T A C A T C G A G C T
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTCACAGCGT-
-DCTCAGCAGG
 A G T C A C G T T G A C G T C A T A G C T C G A A T C G G T A C A T C G A G C T A C G T
A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTCACAGCGT
VBTGWCAGCB-
 A C G T A G T C A C G T T G A C G T C A T A G C T C G A A T C G G T A C A T C G A G C T
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTCACAGCGT----
GAGCACAGCAGGACA
 A C G T A G T C A C G T T G A C G T C A T A G C T C G A A T C G G T A C A T C G A G C T A C G T A C G T A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTCACAGCGT----
CCACACAGCAGGAGA
 A C G T A G T C A C G T T G A C G T C A T A G C T C G A A T C G G T A C A T C G A G C T A C G T A C G T A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

MEIS2/MA0774.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CTCACAGCGT
TTGACAGC--
 A G T C A C G T T G A C G T C A T A G C T C G A A T C G G T A C A T C G A G C T
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T