Information for 4-CCGGAGCAGCAGCGGC (Motif 15)

A T G C A T G C A T C G A C T G T G C A A C T G G T A C C G T A A T C G A T G C C G T A A C T G A G T C C T A G A C T G G T A C
Reverse Opposite:
A C T G G T A C A G T C T C A G A G T C G A C T A T C G A T G C C G A T A C T G G T A C A C G T G T A C A T G C A T C G A T C G
p-value:1e-16
log p-value:-3.828e+01
Information Content per bp:1.726
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets51.1 +/- 23.2bp
Average Position of motif in Background58.9 +/- 13.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CCGGAGCAGCAGCGGC
----CGCAGCTGCG--
 A T G C A T G C A T C G A C T G T G C A A C T G G T A C C G T A A T C G A T G C C G T A A C T G A G T C C T A G A C T G G T A C
A C G T A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CCGGAGCAGCAGCGGC-
NNNNAGCAGCTGCTGAN
 A T G C A T G C A T C G A C T G T G C A A C T G G T A C C G T A A T C G A T G C C G T A A C T G A G T C C T A G A C T G G T A C A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CCGGAGCAGCAGCGGC
----AGCAGCTGCTNN
 A T G C A T G C A T C G A C T G T G C A A C T G G T A C C G T A A T C G A T G C C G T A A C T G A G T C C T A G A C T G G T A C
A C G T A C G T A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

Ascl2/MA0816.1/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CCGGAGCAGCAGCGGC
----AGCAGCTGCT--
 A T G C A T G C A T C G A C T G T G C A A C T G G T A C C G T A A T C G A T G C C G T A A C T G A G T C C T A G A C T G G T A C
A C G T A C G T A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CCGGAGCAGCAGCGGC
----ANCAGCTG----
 A T G C A T G C A T C G A C T G T G C A A C T G G T A C C G T A A T C G A T G C C G T A A C T G A G T C C T A G A C T G G T A C
A C G T A C G T A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CCGGAGCAGCAGCGGC
---CAGCAGCTGN---
 A T G C A T G C A T C G A C T G T G C A A C T G G T A C C G T A A T C G A T G C C G T A A C T G A G T C C T A G A C T G G T A C
A C G T A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:7
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CCGGAGCAGCAGCGGC
----GACAGCTGCAG-
 A T G C A T G C A T C G A C T G T G C A A C T G G T A C C G T A A T C G A T G C C G T A A C T G A G T C C T A G A C T G G T A C
A C G T A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CCGGAGCAGCAGCGGC-
--ADGGYAGYAGCATCT
 A T G C A T G C A T C G A C T G T G C A A C T G G T A C C G T A A T C G A T G C C G T A A C T G A G T C C T A G A C T G G T A C A C G T
A C G T A C G T C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

Myod1/MA0499.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCGGAGCAGCAGCGGC
-NGNGACAGCTGCN--
 A T G C A T G C A T C G A C T G T G C A A C T G G T A C C G T A A T C G A T G C C G T A A C T G A G T C C T A G A C T G G T A C
A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CCGGAGCAGCAGCGGC
----AACAGCTGCAG-
 A T G C A T G C A T C G A C T G T G C A A C T G G T A C C G T A A T C G A T G C C G T A A C T G A G T C C T A G A C T G G T A C
A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T