Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-81 | -1.866e+02 | 0.0000 | 222.0 | 23.54% | 2362.2 | 5.11% | motif file (matrix) |
svg |
2 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-75 | -1.748e+02 | 0.0000 | 192.0 | 20.36% | 1854.6 | 4.02% | motif file (matrix) |
svg |
3 |
| c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-72 | -1.663e+02 | 0.0000 | 174.0 | 18.45% | 1581.2 | 3.42% | motif file (matrix) |
svg |
4 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-69 | -1.603e+02 | 0.0000 | 278.0 | 29.48% | 4221.8 | 9.14% | motif file (matrix) |
svg |
5 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-65 | -1.509e+02 | 0.0000 | 262.0 | 27.78% | 3956.2 | 8.56% | motif file (matrix) |
svg |
6 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-47 | -1.083e+02 | 0.0000 | 170.0 | 18.03% | 2288.9 | 4.96% | motif file (matrix) |
svg |
7 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-46 | -1.076e+02 | 0.0000 | 188.0 | 19.94% | 2774.2 | 6.01% | motif file (matrix) |
svg |
8 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-41 | -9.661e+01 | 0.0000 | 142.0 | 15.06% | 1792.8 | 3.88% | motif file (matrix) |
svg |
9 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-38 | -8.782e+01 | 0.0000 | 126.0 | 13.36% | 1550.7 | 3.36% | motif file (matrix) |
svg |
10 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-21 | -4.839e+01 | 0.0000 | 84.0 | 8.91% | 1207.7 | 2.61% | motif file (matrix) |
svg |
11 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-13 | -3.057e+01 | 0.0000 | 52.0 | 5.51% | 742.7 | 1.61% | motif file (matrix) |
svg |
12 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-12 | -2.842e+01 | 0.0000 | 85.0 | 9.01% | 1748.7 | 3.79% | motif file (matrix) |
svg |
13 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-12 | -2.807e+01 | 0.0000 | 254.0 | 26.94% | 8119.0 | 17.58% | motif file (matrix) |
svg |
14 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-8 | -2.052e+01 | 0.0000 | 96.0 | 10.18% | 2439.0 | 5.28% | motif file (matrix) |
svg |
15 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-8 | -1.860e+01 | 0.0000 | 194.0 | 20.57% | 6380.1 | 13.81% | motif file (matrix) |
svg |
16 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-7 | -1.754e+01 | 0.0000 | 58.0 | 6.15% | 1271.2 | 2.75% | motif file (matrix) |
svg |
17 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-7 | -1.722e+01 | 0.0000 | 55.0 | 5.83% | 1186.1 | 2.57% | motif file (matrix) |
svg |
18 |
| HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer | 1e-6 | -1.583e+01 | 0.0000 | 139.0 | 14.74% | 4363.0 | 9.45% | motif file (matrix) |
svg |
19 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-6 | -1.513e+01 | 0.0000 | 52.0 | 5.51% | 1168.9 | 2.53% | motif file (matrix) |
svg |
20 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-6 | -1.462e+01 | 0.0000 | 75.0 | 7.95% | 1989.9 | 4.31% | motif file (matrix) |
svg |
21 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-5 | -1.222e+01 | 0.0001 | 39.0 | 4.14% | 856.5 | 1.85% | motif file (matrix) |
svg |
22 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-5 | -1.188e+01 | 0.0001 | 83.0 | 8.80% | 2453.1 | 5.31% | motif file (matrix) |
svg |
23 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-3 | -8.870e+00 | 0.0022 | 45.0 | 4.77% | 1217.1 | 2.63% | motif file (matrix) |
svg |
24 |
| Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer | 1e-3 | -8.045e+00 | 0.0049 | 158.0 | 16.76% | 5935.6 | 12.85% | motif file (matrix) |
svg |
25 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.297e+00 | 0.0099 | 127.0 | 13.47% | 4684.5 | 10.14% | motif file (matrix) |
svg |
26 |
| Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer | 1e-3 | -7.096e+00 | 0.0116 | 13.0 | 1.38% | 223.0 | 0.48% | motif file (matrix) |
svg |
27 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-3 | -6.914e+00 | 0.0134 | 16.0 | 1.70% | 315.4 | 0.68% | motif file (matrix) |
svg |
28 |
| Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer | 1e-2 | -6.406e+00 | 0.0215 | 11.0 | 1.17% | 183.1 | 0.40% | motif file (matrix) |
svg |
29 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-2 | -6.365e+00 | 0.0216 | 54.0 | 5.73% | 1731.5 | 3.75% | motif file (matrix) |
svg |
30 |
| Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer | 1e-2 | -6.199e+00 | 0.0247 | 77.0 | 8.17% | 2686.5 | 5.82% | motif file (matrix) |
svg |
31 |
| E-box(bHLH)/Promoter/Homer | 1e-2 | -5.843e+00 | 0.0341 | 15.0 | 1.59% | 319.2 | 0.69% | motif file (matrix) |
svg |
32 |
| NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer | 1e-2 | -5.246e+00 | 0.0599 | 87.0 | 9.23% | 3220.7 | 6.97% | motif file (matrix) |
svg |
33 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-2 | -5.044e+00 | 0.0711 | 11.0 | 1.17% | 220.3 | 0.48% | motif file (matrix) |
svg |
34 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -4.868e+00 | 0.0823 | 29.0 | 3.08% | 866.7 | 1.88% | motif file (matrix) |
svg |
35 |
| Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer | 1e-2 | -4.858e+00 | 0.0823 | 14.0 | 1.48% | 323.8 | 0.70% | motif file (matrix) |
svg |
36 |
| p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer | 1e-2 | -4.718e+00 | 0.0904 | 5.0 | 0.53% | 61.3 | 0.13% | motif file (matrix) |
svg |