Information for 4-TAATCTAACA (Motif 5)

C A G T G T C A G C T A C G A T A T G C G A C T G C T A T C G A G A T C C G T A
Reverse Opposite:
C G A T C T A G A G C T C G A T C T G A T A C G G C T A C G A T C A G T G T C A
p-value:1e-11
log p-value:-2.597e+01
Information Content per bp:1.675
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif3.61%
Number of Background Sequences with motif392.7
Percentage of Background Sequences with motif0.85%
Average Position of motif in Targets36.2 +/- 27.6bp
Average Position of motif in Background48.9 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TAATCTAACA
YTAATCCY---
 A C G T C A G T G T C A G C T A C G A T A T G C G A C T G C T A T C G A G A T C C G T A
G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TAATCTAACA
GCTAATCC----
 A C G T A C G T C A G T G T C A G C T A C G A T A T G C G A C T G C T A T C G A G A T C C G T A
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TAATCTAACA
TTAATCCT---
 A C G T C A G T G T C A G C T A C G A T A T G C G A C T G C T A T C G A G A T C C G T A
G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TAATCTAACA
TTAATCCC---
 A C G T C A G T G T C A G C T A C G A T A T G C G A C T G C T A T C G A G A T C C G T A
G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TAATCTAACA---
-AAACAAACATTC
 C A G T G T C A G C T A C G A T A T G C G A C T G C T A T C G A G A T C C G T A A C G T A C G T A C G T
A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

OTX1/MA0711.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TAATCTAACA
TTAATCCG---
 A C G T C A G T G T C A G C T A C G A T A T G C G A C T G C T A T C G A G A T C C G T A
G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G A C G T A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TAATCTAACA
CCTAATCCGC--
 A C G T A C G T C A G T G T C A G C T A C G A T A T G C G A C T G C T A T C G A G A T C C G T A
T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TAATCTAACA
CTTAATCCC---
 A C G T A C G T C A G T G T C A G C T A C G A T A T G C G A C T G C T A T C G A G A T C C G T A
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TAATCTAACA
NYTAATCCYB--
 A C G T A C G T C A G T G T C A G C T A C G A T A T G C G A C T G C T A T C G A G A T C C G T A
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TAATCTAACA
GCTAATCCCC--
 A C G T A C G T C A G T G T C A G C T A C G A T A T G C G A C T G C T A T C G A G A T C C G T A
T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C A C G T A C G T