Information for 5-CCAGGCGGCGGTCCCT (Motif 11)

A G T C A G T C C T G A A C T G A C T G A G T C A C T G A T C G A G T C A C T G A T C G A G C T G T A C A T G C A G T C A C G T
Reverse Opposite:
C G T A A C T G A T C G A C T G C T G A A T G C A G T C A C T G A T G C A G T C A C T G A G T C A G T C A G C T A C T G A C T G
p-value:1e-8
log p-value:-1.877e+01
Information Content per bp:1.884
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.2 +/- 10.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCAGGCGGCGGTCCCT
-CAGGCCNNGGCCNN-
 A G T C A G T C C T G A A C T G A C T G A G T C A C T G A T C G A G T C A C T G A T C G A G C T G T A C A T G C A G T C A C G T
A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCAGGCGGCGGTCCCT
NNNAAGGGGGCGGGNNN-
 A C G T A C G T A G T C A G T C C T G A A C T G A C T G A G T C A C T G A T C G A G T C A C T G A T C G A G C T G T A C A T G C A G T C A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CCAGGCGGCGGTCCCT
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A G T C A G T C C T G A A C T G A C T G A G T C A C T G A T C G A G T C A C T G A T C G A G C T G T A C A T G C A G T C A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:4
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------CCAGGCGGCGGTCCCT
TGGCCACCAGGGGGCGCTA---
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C T G A A C T G A C T G A G T C A C T G A T C G A G T C A C T G A T C G A G C T G T A C A T G C A G T C A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CCAGGCGGCGGTCCCT
---GGGGGCGGGGCC-
 A G T C A G T C C T G A A C T G A C T G A G T C A C T G A T C G A G T C A C T G A T C G A G C T G T A C A T G C A G T C A C G T
A C G T A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T

SP2/MA0516.1/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CCAGGCGGCGGTCCCT
GGGNGGGGGCGGGGC--
 A C G T A G T C A G T C C T G A A C T G A C T G A G T C A C T G A T C G A G T C A C T G A T C G A G C T G T A C A T G C A G T C A C G T
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T

PB0147.1_Max_2/Jaspar

Match Rank:7
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CCAGGCGGCGGTCCCT
GTGCCACGCGACTG-----
 A C G T A C G T A C G T A G T C A G T C C T G A A C T G A C T G A G T C A C T G A T C G A G T C A C T G A T C G A G C T G T A C A T G C A G T C A C G T
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G A C G T A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CCAGGCGGCGGTCCCT
---GGCGCGCT-----
 A G T C A G T C C T G A A C T G A C T G A G T C A C T G A T C G A G T C A C T G A T C G A G C T G T A C A T G C A G T C A C G T
A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CCAGGCGGCGGTCCCT
TGTCAGGGGGCG------
 A C G T A C G T A G T C A G T C C T G A A C T G A C T G A G T C A C T G A T C G A G T C A C T G A T C G A G C T G T A C A T G C A G T C A C G T
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T A C G T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.51
Offset:-6
Orientation:reverse strand
Alignment:------CCAGGCGGCGGTCCCT
TGGCCACCAGGTGGCACTNT--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C T G A A C T G A C T G A G T C A C T G A T C G A G T C A C T G A T C G A G C T G T A C A T G C A G T C A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T A C G T A C G T