Information for 11-GCTCGCTAAT (Motif 15)

A T C G A G T C C G A T G A T C T A C G T G A C A G C T C G T A C G T A G C A T
Reverse Opposite:
C G T A G C A T G C A T C T G A A C T G A T G C C T A G G C T A C T A G T A G C
p-value:1e-4
log p-value:-1.088e+01
Information Content per bp:1.554
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif5.11%
Number of Background Sequences with motif1172.4
Percentage of Background Sequences with motif2.52%
Average Position of motif in Targets63.1 +/- 26.1bp
Average Position of motif in Background50.4 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EVX1/MA0887.1/Jaspar

Match Rank:1
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:GCTCGCTAAT----
----GNTAATTANN
 A T C G A G T C C G A T G A T C T A C G T G A C A G C T C G T A C G T A G C A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G T A G C G A C T C T G A T G C A A G C T A G C T C T G A A T G C A G T C

EVX2/MA0888.1/Jaspar

Match Rank:2
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:GCTCGCTAAT----
----NNTAATTANN
 A T C G A G T C C G A T G A T C T A C G T G A C A G C T C G T A C G T A G C A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G A T G C G A C T T C G A T G C A A G C T A C G T C T G A A T G C A T G C

HOXA2/MA0900.1/Jaspar

Match Rank:3
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:GCTCGCTAAT----
----GNTAATTANN
 A T C G A G T C C G A T G A T C T A C G T G A C A G C T C G T A C G T A G C A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A T C G C G A T C T G A G T C A A G C T A C G T C T G A A T C G A T C G

HOXB3/MA0903.1/Jaspar

Match Rank:4
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:GCTCGCTAAT----
----NNTAATTANN
 A T C G A G T C C G A T G A T C T A C G T G A C A G C T C G T A C G T A G C A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A G T C C G A T C T G A C T G A A G C T A C G T C T G A A T C G G A C T

HOXB2/MA0902.1/Jaspar

Match Rank:5
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GCTCGCTAAT----
----NNTAATTANN
 A T C G A G T C C G A T G A T C T A C G T G A C A G C T C G T A C G T A G C A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A G C T C G A T C T G A C G T A A G C T A C G T C T G A A T G C A G C T

BARX1/MA0875.1/Jaspar

Match Rank:6
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:GCTCGCTAAT---
-----NTAATTGN
 A T C G A G T C C G A T G A T C T A C G T G A C A G C T C G T A C G T A G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C

HOXA5/MA0158.1/Jaspar

Match Rank:7
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GCTCGCTAAT-
---CACTAATT
 A T C G A G T C C G A T G A T C T A C G T G A C A G C T C G T A C G T A G C A T A C G T
A C G T A C G T A C G T G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:8
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GCTCGCTAAT----
----GCTAATCCCC
 A T C G A G T C C G A T G A T C T A C G T G A C A G C T C G T A C G T A G C A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

PH0139.1_Pitx3/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCTCGCTAAT------
GNNAGCTAATCCCCCN
 A T C G A G T C C G A T G A T C T A C G T G A C A G C T C G T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

EN2/MA0642.1/Jaspar

Match Rank:10
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GCTCGCTAAT----
----GNTAATTGGN
 A T C G A G T C C G A T G A T C T A C G T G A C A G C T C G T A C G T A G C A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G A T G C A G C T T C G A C G T A A C G T A C G T T C A G T A C G A T C G