Information for 7-GGGGATTTTT (Motif 9)

C A T G A C T G C T A G A C T G G C T A G C A T C G A T A G C T G C A T C A G T
Reverse Opposite:
G T C A C G T A C T G A G C T A C G T A C G A T T G A C G A T C G T A C G T A C
p-value:1e-15
log p-value:-3.640e+01
Information Content per bp:1.682
Number of Target Sequences with motif76.0
Percentage of Target Sequences with motif9.37%
Number of Background Sequences with motif1510.1
Percentage of Background Sequences with motif3.17%
Average Position of motif in Targets46.9 +/- 25.4bp
Average Position of motif in Background49.9 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GGGGATTTTT-
NGGGGATTTCCC
 A C G T C A T G A C T G C T A G A C T G G C T A G C A T C G A T A G C T G C A T C A G T A C G T
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GGGGATTTTT
GGGGATTTCC
 C A T G A C T G C T A G A C T G G C T A G C A T C G A T A G C T G C A T C A G T
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GGGGATTTTT
GGGAATTTCC
 C A T G A C T G C T A G A C T G G C T A G C A T C G A T A G C T G C A T C A G T
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

MZF1/MA0056.1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GGGGATTTTT
TGGGGA-----
 A C G T C A T G A C T G C T A G A C T G G C T A G C A T C G A T A G C T G C A T C A G T
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T

PH0129.1_Otx1/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GGGGATTTTT----
AGAGGGGATTAATTTAT
 A C G T A C G T A C G T C A T G A C T G C T A G A C T G G C T A G C A T C G A T A G C T G C A T C A G T A C G T A C G T A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

RELA/MA0107.1/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGGGATTTTT
GGGAATTTCC
 C A T G A C T G C T A G A C T G G C T A G C A T C G A T A G C T G C A T C A G T
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGGGATTTTT
GGGGATTTCC
 C A T G A C T G C T A G A C T G G C T A G C A T C G A T A G C T G C A T C A G T
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

PH0130.1_Otx2/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GGGGATTTTT----
TGTAGGGATTAATTGTC
 A C G T A C G T A C G T C A T G A C T G C T A G A C T G G C T A G C A T C G A T A G C T G C A T C A G T A C G T A C G T A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGGGATTTTT
NGGGATTA--
 C A T G A C T G C T A G A C T G G C T A G C A T C G A T A G C T G C A T C A G T
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGGGATTTTT
CNGTGATTTN-
 A C G T C A T G A C T G C T A G A C T G G C T A G C A T C G A T A G C T G C A T C A G T
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T