Information for 17-TCTGTGCATGCAC (Motif 24)

A C G T T A G C C G A T A T C G A C G T C A T G A G T C C T G A C G A T A T C G A T G C C T G A T G A C
Reverse Opposite:
A C T G G A C T A T C G A T G C G C T A A G C T C T A G G A T C C G T A A T G C G C T A A T C G T G C A
p-value:1e-6
log p-value:-1.431e+01
Information Content per bp:1.704
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif40.5
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets47.5 +/- 16.0bp
Average Position of motif in Background50.0 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TCTGTGCATGCAC
-CTGCGCATGCGC
 A C G T T A G C C G A T A T C G A C G T C A T G A G T C C T G A C G A T A T C G A T G C C T G A T G A C
A C G T A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C

NRF(NRF)/Promoter/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TCTGTGCATGCAC
-GTGCGCATGCGC
 A C G T T A G C C G A T A T C G A C G T C A T G A G T C C T G A C G A T A T C G A T G C C T G A T G A C
A C G T A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TCTGTGCATGCAC
NNNNTTGTGTGCTTNN--
 A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T C A T G A G T C C T G A C G A T A T C G A T G C C T G A T G A C
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TCTGTGCATGCAC
-CTGTTCCTGG--
 A C G T T A G C C G A T A T C G A C G T C A T G A G T C C T G A C G A T A T C G A T G C C T G A T G A C
A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TCTGTGCATGCAC
NNGCGTGTGTGCNGCN--
 A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T C A T G A G T C C T G A C G A T A T C G A T G C C T G A T G A C
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TCTGTGCATGCAC--
TACATGTGCACATAAAA
 A C G T A C G T A C G T T A G C C G A T A T C G A C G T C A T G A G T C C T G A C G A T A T C G A T G C C T G A T G A C A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

NRF1/MA0506.1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TCTGTGCATGCAC
--TGCGCAGGCGC
 A C G T T A G C C G A T A T C G A C G T C A T G A G T C C T G A C G A T A T C G A T G C C T G A T G A C
A C G T A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

PB0026.1_Gm397_1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TCTGTGCATGCAC--
CAGATGTGCACATACGT
 A C G T A C G T A C G T T A G C C G A T A T C G A C G T C A T G A G T C C T G A C G A T A T C G A T G C C T G A T G A C A C G T A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TCTGTGCATGCAC
---TTGCGTGCVA
 A C G T T A G C C G A T A T C G A C G T C A T G A G T C C T G A C G A T A T C G A T G C C T G A T G A C
A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TCTGTGCATGCAC---
-ATTTGCATACAATGG
 A C G T T A G C C G A T A T C G A C G T C A T G A G T C C T G A C G A T A T C G A T G C C T G A T G A C A C G T A C G T A C G T
A C G T G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G