Information for 12-CTGGMGGCWGACW (Motif 13)

A T G C A C G T A C T G A C T G G T A C A T C G C T A G A T G C G C T A C A T G G T C A A T G C C G A T
Reverse Opposite:
C G T A A T C G A C G T G A T C C G A T A T C G A G T C A T G C A C T G A G T C A G T C C G T A A T C G
p-value:1e-11
log p-value:-2.653e+01
Information Content per bp:1.762
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif27.4
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets51.7 +/- 28.8bp
Average Position of motif in Background52.0 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CTGGMGGCWGACW
NAGANTGGCGGGGNGNA
 A C G T A C G T A C G T A C G T A T G C A C G T A C T G A C T G G T A C A T C G C T A G A T G C G C T A C A T G G T C A A T G C C G A T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTGGMGGCWGACW
BTKGGCGGGAAA--
 A C G T A T G C A C G T A C T G A C T G G T A C A T C G C T A G A T G C G C T A C A T G G T C A A T G C C G A T
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTGGMGGCWGACW-
-AGGTGNCAGACAG
 A T G C A C G T A C T G A C T G G T A C A T C G C T A G A T G C G C T A C A T G G T C A A T G C C G A T A C G T
A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

E2F6/MA0471.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CTGGMGGCWGACW
-GGGCGGGAAGG-
 A T G C A C G T A C T G A C T G G T A C A T C G C T A G A T G C G C T A C A T G G T C A A T G C C G A T
A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CTGGMGGCWGACW
-AGGTGHCAGACA
 A T G C A C G T A C T G A C T G G T A C A T C G C T A G A T G C G C T A C A T G G T C A A T G C C G A T
A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

YY2/MA0748.1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTGGMGGCWGACW
TAATGGCGGNC----
 A C G T A C G T A T G C A C G T A C T G A C T G G T A C A T C G C T A G A T G C G C T A C A T G G T C A A T G C C G A T
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTGGMGGCWGACW
CWGGCGGGAA---
 A T G C A C G T A C T G A C T G G T A C A T C G C T A G A T G C G C T A C A T G G T C A A T G C C G A T
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTGGMGGCWGACW
TTGGCA-------
 A T G C A C G T A C T G A C T G G T A C A T C G C T A G A T G C G C T A C A T G G T C A A T G C C G A T
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CTGGMGGCWGACW
CAAGATGGCGGC-----
 A C G T A C G T A C G T A C G T A T G C A C G T A C T G A C T G G T A C A T C G C T A G A T G C G C T A C A T G G T C A A T G C C G A T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CTGGMGGCWGACW
GGTCTGGCAT------
 A C G T A C G T A C G T A T G C A C G T A C T G A C T G G T A C A T C G C T A G A T G C G C T A C A T G G T C A A T G C C G A T
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T