Information for 7-AGTCAKGGGGCTTTCT (Motif 12)

C G T A A C T G A G C T A G T C C G T A A C T G A C T G A T C G C T A G T A C G A G T C C G A T C G A T A C G T A G T C A C G T
Reverse Opposite:
G T C A T A C G T G C A C G T A C G T A T A C G A T G C G A T C T A G C T A G C G T A C A C G T T A C G C T G A A G T C A C G T
p-value:1e-11
log p-value:-2.691e+01
Information Content per bp:1.687
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.3 +/- 22.5bp
Average Position of motif in Background35.8 +/- 20.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax2/MA0067.1/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGTCAKGGGGCTTTCT
AGTCACGC--------
 C G T A A C T G A G C T A G T C C G T A A C T G A C T G A T C G C T A G T A C G A G T C C G A T C G A T A C G T A G T C A C G T
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:2
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AGTCAKGGGGCTTTCT
----AGGVNCCTTTGT
 C G T A A C T G A G C T A G T C C G T A A C T G A C T G A T C G C T A G T A C G A G T C C G A T C G A T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

Nr2e1/MA0676.1/Jaspar

Match Rank:3
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AGTCAKGGGGCTTTCT
AAAAGTCAA----------
 A C G T A C G T A C G T C G T A A C T G A G C T A G T C C G T A A C T G A C T G A T C G C T A G T A C G A G T C C G A T C G A T A C G T A G T C A C G T
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0147.1_Max_2/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGTCAKGGGGCTTTCT
GTGCCACGCGACTG---
 A C G T C G T A A C T G A G C T A G T C C G T A A C T G A C T G A T C G C T A G T A C G A G T C C G A T C G A T A C G T A G T C A C G T
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G A C G T A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AGTCAKGGGGCTTTCT
-GTCACGCTCNCTGA-
 C G T A A C T G A G C T A G T C C G T A A C T G A C T G A T C G C T A G T A C G A G T C C G A T C G A T A C G T A G T C A C G T
A C G T A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AGTCAKGGGGCTTTCT
-GTCWGCTGTYYCTCT
 C G T A A C T G A G C T A G T C C G T A A C T G A C T G A T C G C T A G T A C G A G T C C G A T C G A T A C G T A G T C A C G T
A C G T C T A G A C G T A G T C C G T A A C T G A G T C G C A T A C T G G C A T A G T C G A C T G A T C G C A T A G T C A G C T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:7
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------AGTCAKGGGGCTTTCT
ACTYKNATTCGTGNTACTTC--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G C T A G T C C G T A A C T G A C T G A T C G C T A G T A C G A G T C C G A T C G A T A C G T A G T C A C G T
C T G A G T A C G A C T A G T C C A G T T G C A C T G A A C G T A G C T G A T C C T A G C G A T A C T G A T G C G A C T C T G A G A T C G A C T A G C T G A T C A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AGTCAKGGGGCTTTCT
-GTCATN---------
 C G T A A C T G A G C T A G T C C G T A A C T G A C T G A T C G C T A G T A C G A G T C C G A T C G A T A C G T A G T C A C G T
A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--AGTCAKGGGGCTTTCT
TGAGTCA-----------
 A C G T A C G T C G T A A C T G A G C T A G T C C G T A A C T G A C T G A T C G C T A G T A C G A G T C C G A T C G A T A C G T A G T C A C G T
G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mitf/MA0620.1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AGTCAKGGGGCTTTCT
GGTCACGTGG------
 C G T A A C T G A G C T A G T C C G T A A C T G A C T G A T C G C T A G T A C G A G T C C G A T C G A T A C G T A G T C A C G T
C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T