Information for 11-TTTAGCAAAAGTA (Motif 11)

A C G T A C G T A C G T C G T A A C T G T A G C C G T A C G T A G T C A C G T A A C T G A C G T C G T A
Reverse Opposite:
C G A T C G T A A G T C A C G T A C G T A C G T A C G T A T C G A G T C A C G T C G T A G T C A G T C A
p-value:1e-11
log p-value:-2.691e+01
Information Content per bp:1.910
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets18.7 +/- 16.6bp
Average Position of motif in Background46.1 +/- 12.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTTAGCAAAAGTA-
CAATTGCAAAAATAT
 A C G T A C G T A C G T A C G T C G T A A C T G T A G C C G T A C G T A G T C A C G T A A C T G A C G T C G T A A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TTTAGCAAAAGTA
SCCTAGCAACAG--
 A C G T A C G T A C G T A C G T C G T A A C T G T A G C C G T A C G T A G T C A C G T A A C T G A C G T C G T A
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TTTAGCAAAAGTA
GAAAGTGAAAGT-
 A C G T A C G T A C G T C G T A A C T G T A G C C G T A C G T A G T C A C G T A A C T G A C G T C G T A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:4
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------TTTAGCAAAAGTA---
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G T A G C C G T A C G T A G T C A C G T A A C T G A C G T C G T A A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TTTAGCAAAAGTA
NATGTTGCAA-----
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G T A G C C G T A C G T A G T C A C G T A A C T G A C G T C G T A
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TTTAGCAAAAGTA
TCTTTANTAATANN-
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G T A G C C G T A C G T A G T C A C G T A A C T G A C G T C G T A
A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TTTAGCAAAAGTA-
NNTNNCAATATTAG
 A C G T A C G T A C G T C G T A A C T G T A G C C G T A C G T A G T C A C G T A A C T G A C G T C G T A A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TTTAGCAAAAGTA-
NNTNNCAATATTAG
 A C G T A C G T A C G T C G T A A C T G T A G C C G T A C G T A G T C A C G T A A C T G A C G T C G T A A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TTTAGCAAAAGTA
CCGCATAGCAACGGA-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G T A G C C G T A C G T A G T C A C G T A A C T G A C G T C G T A
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TTTAGCAAAAGTA
TACCATAGCAACGGT-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G T A G C C G T A C G T A G T C A C G T A A C T G A C G T C G T A
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T A C G T