Information for 1-NDNHNGGGRAWTYCCC (Motif 1)

T C G A C T A G A T G C G A C T C T A G C A T G A C T G C A T G C T A G C G T A C G A T A C G T G A T C A G T C A G T C G T A C
Reverse Opposite:
C A T G C T A G C T A G C T A G T G C A G C T A G C A T G A T C G T A C A G T C G T A C G A T C C T G A T A C G G A T C A G C T
p-value:1e-72
log p-value:-1.671e+02
Information Content per bp:1.567
Number of Target Sequences with motif115.0
Percentage of Target Sequences with motif14.18%
Number of Background Sequences with motif704.3
Percentage of Background Sequences with motif1.48%
Average Position of motif in Targets52.3 +/- 20.3bp
Average Position of motif in Background49.5 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:1
Score:0.95
Offset:4
Orientation:forward strand
Alignment:NDNHNGGGRAWTYCCC
----NGGGGATTTCCC
 T C G A C T A G A T G C G A C T C T A G C A T G A C T G C A T G C T A G C G T A C G A T A C G T G A T C A G T C A G T C G T A C
A C G T A C G T A C G T A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

NFKB2/MA0778.1/Jaspar

Match Rank:2
Score:0.94
Offset:4
Orientation:reverse strand
Alignment:NDNHNGGGRAWTYCCC-
----AGGGGAATCCCCT
 T C G A C T A G A T G C G A C T C T A G C A T G A C T G C A T G C T A G C G T A C G A T A C G T G A T C A G T C A G T C G T A C A C G T
A C G T A C G T A C G T A C G T T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.91
Offset:5
Orientation:forward strand
Alignment:NDNHNGGGRAWTYCCC
-----GGGGATTTCC-
 T C G A C T A G A T G C G A C T C T A G C A T G A C T G C A T G C T A G C G T A C G A T A C G T G A T C A G T C A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:4
Score:0.90
Offset:5
Orientation:reverse strand
Alignment:NDNHNGGGRAWTYCCC-
-----GGGGATTCCCCC
 T C G A C T A G A T G C G A C T C T A G C A T G A C T G C A T G C T A G C G T A C G A T A C G T G A T C A G T C A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

NFKB1/MA0105.4/Jaspar

Match Rank:5
Score:0.89
Offset:4
Orientation:reverse strand
Alignment:NDNHNGGGRAWTYCCC-
----AGGGGATTCCCCT
 T C G A C T A G A T G C G A C T C T A G C A T G A C T G C A T G C T A G C G T A C G A T A C G T G A T C A G T C A G T C G T A C A C G T
A C G T A C G T A C G T A C G T T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

RELA/MA0107.1/Jaspar

Match Rank:6
Score:0.87
Offset:5
Orientation:forward strand
Alignment:NDNHNGGGRAWTYCCC
-----GGGAATTTCC-
 T C G A C T A G A T G C G A C T C T A G C A T G A C T G C A T G C T A G C G T A C G A T A C G T G A T C A G T C A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.86
Offset:5
Orientation:reverse strand
Alignment:NDNHNGGGRAWTYCCC
-----GGGAATTTCC-
 T C G A C T A G A T G C G A C T C T A G C A T G A C T G C A T G C T A G C G T A C G A T A C G T G A T C A G T C A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T

REL/MA0101.1/Jaspar

Match Rank:8
Score:0.84
Offset:5
Orientation:forward strand
Alignment:NDNHNGGGRAWTYCCC
-----GGGGATTTCC-
 T C G A C T A G A T G C G A C T C T A G C A T G A C T G C A T G C T A G C G T A C G A T A C G T G A T C A G T C A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T

MZF1/MA0056.1/Jaspar

Match Rank:9
Score:0.62
Offset:4
Orientation:forward strand
Alignment:NDNHNGGGRAWTYCCC
----TGGGGA------
 T C G A C T A G A T G C G A C T C T A G C A T G A C T G C A T G C T A G C G T A C G A T A C G T G A T C A G T C A G T C G T A C
A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0201.1_Zfp281_2/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-NDNHNGGGRAWTYCCC
NNNATTGGGGGTNTCCT
 A C G T T C G A C T A G A T G C G A C T C T A G C A T G A C T G C A T G C T A G C G T A C G A T A C G T G A T C A G T C A G T C G T A C
A G T C G C T A G C T A G C T A C G A T C G A T A C T G A C T G A C T G C A T G A C T G A G C T G T A C G C A T G T A C G T A C G C A T