Information for 7-TGTAATGAAT (Motif 6)

A C G T A C T G A G C T C T G A C G T A C G A T A C T G C T G A C G T A A C G T
Reverse Opposite:
C G T A A C G T A G C T A G T C G C T A A C G T A G C T C T G A A G T C C G T A
p-value:1e-16
log p-value:-3.820e+01
Information Content per bp:1.918
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif45.83%
Number of Background Sequences with motif353.5
Percentage of Background Sequences with motif0.82%
Average Position of motif in Targets50.4 +/- 25.2bp
Average Position of motif in Background48.5 +/- 37.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--TGTAATGAAT--
NNTNTCATGAATGT
 A C G T A C G T A C G T A C T G A G C T C T G A C G T A C G A T A C T G C T G A C G T A A C G T A C G T A C G T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

PB0068.1_Sox1_1/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TGTAATGAAT-----
NNNTATTGAATTGNNN
 A C G T A C G T A C T G A G C T C T G A C G T A C G A T A C T G C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

PH0038.1_Hlx/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGTAATGAAT-----
TGTAATTAATTATGG
 A C G T A C T G A G C T C T G A C G T A C G A T A C T G C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C T A G G A C T G C T A C G T A G A C T G A C T C G T A C T G A G C A T C G A T C T G A C A G T C A T G C A T G

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGTAATGAAT
GKTAATGR--
 A C G T A C T G A G C T C T G A C G T A C G A T A C T G C T G A C G T A A C G T
A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T

PH0063.1_Hoxb8/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TGTAATGAAT---
ACCGGCAATTAATAAA
 A C G T A C G T A C G T A C G T A C T G A G C T C T G A C G T A C G A T A C T G C T G A C G T A A C G T A C G T A C G T A C G T
G C T A T A G C A G T C C A T G C T A G G A T C G T C A C G T A C G A T G C A T C G T A G C T A G A C T G T C A C T G A C G T A

PH0118.1_Nkx6-1_1/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TGTAATGAAT----
CNNAGTAATTAATTNNC
 A C G T A C G T A C G T A C G T A C T G A G C T C T G A C G T A C G A T A C T G C T G A C G T A A C G T A C G T A C G T A C G T A C G T
T A G C T C A G T C G A C T G A C A T G G A C T G T C A C G T A C G A T C G A T C T G A G C T A C G A T G C A T C G A T A C G T G A T C

MEOX2/MA0706.1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGTAATGAAT
AGTAATTAAC
 A C G T A C T G A G C T C T G A C G T A C G A T A C T G C T G A C G T A A C G T
C T G A T A C G G A C T T G C A G T C A C A G T A G C T C T G A C G T A T G A C

PB0170.1_Sox17_2/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGTAATGAAT------
NTTNTATGAATGTGNNC
 A C G T A C G T A C T G A G C T C T G A C G T A C G A T A C T G C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

PB0028.1_Hbp1_1/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TGTAATGAAT---
ACTATGAATGAATGAT
 A C G T A C G T A C G T A C G T A C T G A G C T C T G A C G T A C G A T A C T G C T G A C G T A A C G T A C G T A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

PH0119.1_Nkx6-1_2/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGTAATGAAT----
GANGTAATTAATTANN
 A C G T A C G T A C G T A C T G A G C T C T G A C G T A C G A T A C T G C T G A C G T A A C G T A C G T A C G T A C G T A C G T
T C A G C T G A T G C A T C A G G A C T T G C A C G T A C G A T G A C T C T G A G C T A C G A T C G A T C T G A A G T C A G C T