Information for 3-CATAMGAGAA (Motif 5)

A G T C C G T A A G C T T G C A G T A C A C T G C G T A A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T G T A C A C G T A G T C C A T G A C G T C T G A A C G T A C T G
p-value:1e-29
log p-value:-6.835e+01
Information Content per bp:1.886
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif62.50%
Number of Background Sequences with motif177.7
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets53.5 +/- 22.7bp
Average Position of motif in Background44.7 +/- 40.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mecom/MA0029.1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CATAMGAGAA--
AAGATAAGATAACA
 A C G T A C G T A G T C C G T A A G C T T G C A G T A C A C T G C G T A A C T G C G T A C G T A A C G T A C G T
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

PB0032.1_IRC900814_1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CATAMGAGAA-----
ATTTACGACAAATAGC
 A C G T A G T C C G T A A G C T T G C A G T A C A C T G C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

PB0138.1_Irf4_2/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CATAMGAGAA----
GNNACCGAGAATNNN
 A C G T A G T C C G T A A G C T T G C A G T A C A C T G C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

PB0148.1_Mtf1_2/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CATAMGAGAA---
AAATAAGAAAAAAC
 A C G T A G T C C G T A A G C T T G C A G T A C A C T G C G T A A C T G C G T A C G T A A C G T A C G T A C G T
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

Atoh1/MA0461.2/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CATAMGAGAA
ANCATATGTT--
 A C G T A C G T A G T C C G T A A G C T T G C A G T A C A C T G C G T A A C T G C G T A C G T A
C T G A T G C A G T A C G C T A A C G T G T C A A G C T A C T G A C G T A G C T A C G T A C G T

Neurog1/MA0623.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CATAMGAGAA
ACCATATGGT--
 A C G T A C G T A G T C C G T A A G C T T G C A G T A C A C T G C G T A A C T G C G T A C G T A
T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A T C G G A C T A C G T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CATAMGAGAA
ACCATATGTT--
 A C G T A C G T A G T C C G T A A G C T T G C A G T A C A C T G C G T A A C T G C G T A C G T A
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T A C G T

BHLHE22/MA0818.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CATAMGAGAA
ACCATATGTT--
 A C G T A C G T A G T C C G T A A G C T T G C A G T A C A C T G C G T A A C T G C G T A C G T A
T C G A T G A C G T A C C T G A A G C T G T C A G A C T A C T G A G C T G A C T A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CATAMGAGAA
CCATATGT---
 A C G T A G T C C G T A A G C T T G C A G T A C A C T G C G T A A C T G C G T A C G T A
T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T A C G T A C G T

NEUROD2/MA0668.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CATAMGAGAA
ACCATATGGC--
 A C G T A C G T A G T C C G T A A G C T T G C A G T A C A C T G C G T A A C T G C G T A C G T A
C T G A T G A C G T A C C T G A A C G T C T G A G A C T A T C G A C T G A G T C A C G T A C G T