Information for 4-TCTGATGTTTAGTAAG (Motif 4)

A C G T A G T C A C G T A C T G C T G A A C G T A C T G C G A T A C G T A C G T C G T A T A C G A G C T C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T C G A T C T G A A G T C A C G T T G C A C G T A C G T A A G T C C G T A A G C T G T A C C G T A A C T G C G T A
p-value:1e-41
log p-value:-9.501e+01
Information Content per bp:1.876
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif45.83%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.4 +/- 24.0bp
Average Position of motif in Background62.8 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxa2/MA0047.2/Jaspar

Match Rank:1
Score:0.61
Offset:5
Orientation:forward strand
Alignment:TCTGATGTTTAGTAAG-
-----TGTTTACTTAGG
 A C G T A G T C A C G T A C T G C T G A A C G T A C T G C G A T A C G T A C G T C G T A T A C G A G C T C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TCTGATGTTTAGTAAG-
--BSNTGTTTACWYWGN
 A C G T A G T C A C G T A C T G C T G A A C G T A C T G C G A T A C G T A C G T C G T A T A C G A G C T C G T A C G T A A C T G A C G T
A C G T A C G T A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TCTGATGTTTAGTAAG
-----TGTTTACTTT-
 A C G T A G T C A C G T A C T G C T G A A C G T A C T G C G A T A C G T A C G T C G T A T A C G A G C T C G T A C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:4
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TCTGATGTTTAGTAAG
-----TGTTTACTTT-
 A C G T A G T C A C G T A C T G C T G A A C G T A C T G C G A T A C G T A C G T C G T A T A C G A G C T C G T A C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TCTGATGTTTAGTAAG
-TCCATGTTTACTTTG
 A C G T A G T C A C G T A C T G C T G A A C G T A C T G C G A T A C G T A C G T C G T A T A C G A G C T C G T A C G T A A C T G
A C G T G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G

FOXC1/MA0032.2/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TCTGATGTTTAGTAAG
----ATATTTACATA-
 A C G T A G T C A C G T A C T G C T G A A C G T A C T G C G A T A C G T A C G T C G T A T A C G A G C T C G T A C G T A A C T G
A C G T A C G T A C G T A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A A C G T

PH0017.1_Cux1_2/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TCTGATGTTTAGTAAG
TAATGATGATCACTA--
 A C G T A C G T A G T C A C G T A C T G C T G A A C G T A C T G C G A T A C G T A C G T C G T A T A C G A G C T C G T A C G T A A C T G
C G A T T G C A T C G A A G C T C A T G G C T A C G A T C T A G C G T A C A G T G A T C T C G A G T A C C G A T C G T A A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:8
Score:0.56
Offset:5
Orientation:forward strand
Alignment:TCTGATGTTTAGTAAG
-----TGTTTATTT--
 A C G T A G T C A C G T A C T G C T G A A C G T A C T G C G A T A C G T A C G T C G T A T A C G A G C T C G T A C G T A A C T G
A C G T A C G T A C G T A C G T A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T A C G T

FOXD1/MA0031.1/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TCTGATGTTTAGTAAG
----ATGTTTAC----
 A C G T A G T C A C G T A C T G C T G A A C G T A C T G C G A T A C G T A C G T C G T A T A C G A G C T C G T A C G T A A C T G
A C G T A C G T A C G T A C G T G C T A A C G T C A T G A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T

FOXG1/MA0613.1/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TCTGATGTTTAGTAAG
----TTGTTTAC----
 A C G T A G T C A C G T A C T G C T G A A C G T A C T G C G A T A C G T A C G T C G T A T A C G A G C T C G T A C G T A A C T G
A C G T A C G T A C G T A C G T C G A T A C G T A C T G A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T