Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer | 1e-28 | -6.521e+01 | 0.0000 | 98.0 | 32.13% | 3961.2 | 9.19% | motif file (matrix) |
svg |
2 |
| CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-24 | -5.592e+01 | 0.0000 | 62.0 | 20.33% | 1802.2 | 4.18% | motif file (matrix) |
svg |
3 |
| Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer | 1e-19 | -4.530e+01 | 0.0000 | 76.0 | 24.92% | 3282.6 | 7.61% | motif file (matrix) |
svg |
4 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-8 | -1.846e+01 | 0.0000 | 28.0 | 9.18% | 1107.8 | 2.57% | motif file (matrix) |
svg |
5 |
| Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer | 1e-7 | -1.659e+01 | 0.0000 | 53.0 | 17.38% | 3421.5 | 7.93% | motif file (matrix) |
svg |
6 |
| Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer | 1e-6 | -1.608e+01 | 0.0000 | 80.0 | 26.23% | 6322.1 | 14.66% | motif file (matrix) |
svg |
7 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-5 | -1.224e+01 | 0.0003 | 58.0 | 19.02% | 4482.4 | 10.39% | motif file (matrix) |
svg |
8 |
| ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer | 1e-5 | -1.205e+01 | 0.0003 | 25.0 | 8.20% | 1275.5 | 2.96% | motif file (matrix) |
svg |
9 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-5 | -1.164e+01 | 0.0004 | 108.0 | 35.41% | 10469.1 | 24.28% | motif file (matrix) |
svg |
10 |
| NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer | 1e-3 | -8.315e+00 | 0.0089 | 15.0 | 4.92% | 723.1 | 1.68% | motif file (matrix) |
svg |
11 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-3 | -7.487e+00 | 0.0185 | 13.0 | 4.26% | 619.2 | 1.44% | motif file (matrix) |
svg |
12 |
| TATA-Box(TBP)/Promoter/Homer | 1e-3 | -7.332e+00 | 0.0198 | 34.0 | 11.15% | 2653.8 | 6.15% | motif file (matrix) |
svg |
13 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-2 | -6.830e+00 | 0.0303 | 27.0 | 8.85% | 1993.9 | 4.62% | motif file (matrix) |
svg |
14 |
| PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer | 1e-2 | -6.553e+00 | 0.0371 | 6.0 | 1.97% | 169.1 | 0.39% | motif file (matrix) |
svg |
15 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -5.790e+00 | 0.0742 | 24.0 | 7.87% | 1830.9 | 4.25% | motif file (matrix) |
svg |
16 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-2 | -5.106e+00 | 0.1379 | 27.0 | 8.85% | 2263.2 | 5.25% | motif file (matrix) |
svg |
17 |
| PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer | 1e-2 | -4.687e+00 | 0.1972 | 4.0 | 1.31% | 114.3 | 0.27% | motif file (matrix) |
svg |